Ll_transcript_405817

• Id Trinity: TRINITY_DN49537_c2_g3_i3
• Name Transcript: Ll_transcript_405817
• Sequence: AGTGAAGTCTCTTAGTGCTATAGTGTATTTAGTCTACTACATATCTTTTTGCCCATGTAATTGGATGCTTTCATGAGTTATGTCAAATGCATGATTTTCT AAGCTTTGTTGCATACTTGGCATTGATATATATATATATATATGGGTATGATCAATGATTATTGGTACTTAAATATGAACTAAGGATAGAAACATGTTTT TGTACAAAAAATATATTTAATTGTAAATATTGAATTTACCTCTGTATGCACTAATACACCAAAAATCATATGATAATTGTTTTGTTCTGGTTTGTACTTA AGTTTTGTTTCTAATTCATGCAAAGTACTGCATAACTATGGTTTGTATCCAGTGATAACTTTGTGAGTACATCATGGCAGTAGTAAATATGGTTTGAGAA TGCTGCGTAATTTTTGTGCTTTATAAATGTTTGATACTTCAGTTTTTGTTTTTATTTTTACTTGCTTTGAGAATGTTTTGATTGTCGAACAAATGCTCAC TCCATAAGCAATTTTTTATTGTGTTAAGCTTGTTTCTGTGATGCACCGTGGTCTGCGGAGGCGCTGTCTAGACTTTGAGATGGCCAGTGTGCGACAGAAG AACTCAGATGATAATTCAAATACAGTTTTCAGTACTTTACATTCTGATGGGAGGAATGTCACAAATGAAAACCAACTGGTTCATACAAAACACAATAGTG ATTCACGGAAGTGCATTTTGCCGGGAATCGGTTTACACTTGAATGCACTTGCAATCTTAAAAGATCACAATGGCATAAAACATGAAAGGTTGTCCTCTGG AAGGCAACTCAGTCTGATATGCTCCACTTCTTCATTGAAAATCTCTACAAGCCAAGAACATCATCATCTAGCCATGAGTGCTGTATCATCTGAAAGAGAA ATAGATTCATCAAGCAATGGTGTTCAGCCTGCTGAAGAGTGTCGTGAAGATCTCAATCAGAATAGCCCCAAAAAGAAAAAGCGTAAGTCGGACCTAGCTG GTGAAACCGAGGGCTGCAAGCGTTGTAATTGCAAGAAGTCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGGGTCTACTGCATTGAACCATG TTCTTGTCAGGATTGCTTCAACCAGGCTATTCACGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCGTAACCCTCTTGCATTTGCTCCTAAA GTCATCAGAAGTTCCGAGTCTGTTCCGGAAGTTGGGGACGATCCAAATAAAACTCCAGCTTCAGCACGACATAAAAGAGGATGCAACTGCAAGAAATCAA GCTGCCTAAAGAAGTATTGTGAATGTTTTCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGATGCAAAAATGCTTTTGGTAGGAAGGATGG TTCTGCTCTTATAGAAGCTGAACCAGAAGAAGAAACAGAGTCAGGAGAAAAGAGTGTGGCTGAAAAAGATTTACAGAAAACTGAAATTCAGAATATTGAA GATCATTCAGACTCTGCTCTTATCACAACACCATCACTGCTTTCCAGGTCATTGCTTCCATTGCCATTTTCATCCAAGGGAAAGCCACCTAGATCTTTTG TTGCGACCATCTCCGGTTCTGCATTGTTTGCCAGCAGCAGCCAAAAGCTGGAGAAACCAAATTCTCTTTGGTCTCAATCCAAGCATTTTCAAACTGTTCC GGATGATGAAATCCCAGATGTTCTCAGCATTGATATCTCTCCTGTCGCTTGCATCAAAACTTCTTCTCCGAATGGTAAGAGAATCTCTTCTCCTAACTGT GACTTGGGACCGTCTTCGAGTCGCAGAGGTGGCCGAAAGTTGATCTTACAATCCATTCCTTCATTTCCTTCCCTCACCAATCAGCAGTAGAATGCTGTTA TTTTTTTCTTTGTAACTTAGCCCCTAATCCCATCCCCCTCTTTAATCACCATGTTTAGTTTGTAGCTGCATAACCTATGCTTAGGTTTGTGCATATTGAG CTTTTGTTTACTTTGACAATAATATATCGTGTTGCTTAAGTGATGGTTATAAACTTATAATCATTCCCAAGATTAATCTTTATTCTTTAATGATATGGTT TTGGACTATTCCATTACTCAAAACTAATAGATTTGTCTTCTACATTAAAAA
• Tissue: pods
• Gene name: LI_gene_170209;
• Additional information: details;

Expression of Ll_transcript_405817

FPKM

• PAB: 0.2
• PNAB: 0.9
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_405817

• Blastp: Protein tesmin/TSO1-like CXC 2 from Arabidopsis with 54.18% of identity
• Blastx: Protein tesmin/TSO1-like CXC 2 from Arabidopsis with 53.46% of identity
• Eggnog: Tesmin TSO1-like CXC domain containing protein(ENOG4110UR5)
• Kegg: Link to kegg annotations (AT4G14770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422104.1)
• Pfam: Tesmin/TSO1-like CXC domain, cysteine-rich domain (PF03638.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;