Ll_transcript_405822

• Id Trinity: TRINITY_DN49537_c2_g3_i4
• Name Transcript: Ll_transcript_405822
• Sequence: AGTAAGAGTGAGAGTGAGGAATTCATTATCATTATCATCATCATCTTCTTCTTCTTCTTCTTCTACAGAAACAAGAAGATATGGACACACCAGAGAGGAA TCAAATCAACGCTCCTCTTAATCCCAACCAGGATTCACCTGTATTCAACTTTATCAACAATTTATCTCCTATCAAACCTGCTAAGCATGCTCCATTTACT CACACTTTCAATTCCCTCGCATTTTCATCGCCTCCCTCTCTTTTCACATCACCACATGTCACATCTCTCAACGAATCCAGATTCTTAAAGAGGCATATCT CTTTACACACACCAAAGGCTAACGATTCATCTCAAAATGTCAATAAAAAATATTCAAATGAAGAGCCTCTTCCCAATTCAACCGAATTACGGGAAAGTAC AAAACAAGGGATATCAATAGCAGACGATGCGATCGAGTTACCACAATCGTTAAAGTATAATTGTGGTAGCCCCGGCTATGCTTCAACATTTTGCGTTGAT GCGGCCAACAACCTTTTGGAGTTGCCTAGGGAGGCAGCACCGGATGTTACCTATGTTCAGGAAGAAGGCTGTAAAACAGACTCAGTTCAGAGCGAAATTC TTCTTCCGGGAACCTGTCAGATTGAGCCTAAGAGTGAATTCCCAGACCGTGGTTGGGATGGGTTAATTCCTGAACACACTGATCTGTTAATTTTTAATTC GCCTGATGAAGCCAGGGCTTTTAATGGCCTATTTCAGAAACCCTTGGACTCTTCTACAGATCTAATGTCGCTGTTACCGCAATCTACAATCATCAATAAT GGCCACAATGTGCAACTTTTTCATTCAATTGCTTCTCGTTCTGAACTTCAAATTGAAGATCAGCATTCTGACCCATTAGCAGCCACAGAAACAGACCATG CGGTGGACAATGCTGCCATGAATAGCAATCCAAATGAGAAAACAGATGATGAGCTTGTTTCTGTGATGCACCGTGGTCTGCGGAGGCGCTGTCTAGACTT TGAGATGGCCAGTGTGCGACAGAAGAACTCAGATGATAATTCAAATACAGTTTTCAGTACTTTACATTCTGATGGGAGGAATGTCACAAATGAAAACCAA CTGGTTCATACAAAACACAATAGTGATTCACGGAAGTGCATTTTGCCGGGAATCGGTTTACACTTGAATGCACTTGCAATCTTAAAAGATCACAATGGCA TAAAACATGAAAGGTTGTCCTCTGGAAGGCAACTCAGTCTGATATGCTCCACTTCTTCATTGAAAATCTCTACAAGCCAAGAACATCATCATCTAGCCAT GAGTGCTGTATCATCTGAAAGAGAAATAGATTCATCAAGCAATGGTGTTCAGCCTGCTGAAGAGTGTCGTGAAGATCTCAATCAGAATAGCCCCAAAAAG AAAAAGCGTAAGTCGGACCTAGCTGGTGAAACCGAGGGCTGCAAGCGTTGTAATTGCAAGAAGTCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTG CTGGGGTCTACTGCATTGAACCATGTTCTTGTCAGGATTGCTTCAACCAGGCTATTCACGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCG TAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCCGAGTCTGTTCCGGAAGTTGGGGACGATCCAAATAAAACTCCAGCTTCAGCACGACATAAA AGAGGATGCAACTGCAAGAAATCAAGCTGCCTAAAGAAGTATTGTGAATGTTTTCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGATGCA AAAATGCTTTTGGTAGGAAGGATGGTTCTGCTCTTATAGAAGCTGAACCAGAAGAAGAAACAGAGTCAGGAGAAAAGAGTGTGGCTGAAAAAGATTTACA GAAAACTGAAATTCAGAATATTGAAGATCATTCAGACTCTGCTCTTATCACAACACCATCACTGCTTTCCAGGTCATTGCTTCCATTGCCATTTTCATCC AAGGGAAAGCCACCTAGATCTTTTGTTGCGACCATCTCCGGTTCTGCATTGTTTGCCAGCAGCAGCCAAAAGCTGGAGAAACCAAATTCTCTTTGGTCTC AATCCAAGCATTTTCAAACTGTTCCGGATGATGAAATCCCAGATGTTCTCAGCATTGATATCTCTCCTGTCGCTTGCATCAAAACTTCTTCTCCGAATGG TAAGAGAATCTCTTCTCCTAACTGTGACTTGGGACCGTCTTCGAGTCGCAGAGGTGGCCGAAAGTTGATCTTACAATCCATTCCTTCATTTCCTTCCCTC ACCAATCAGCAGTAGAATGCTGTTATTTTTTTCTTTGTAACTTAGCCCCTAATCCCATCCCCCTCTTTAATCACCATGTTTAGTTTGTAGCTGCATAACC TATGCTTAGGTTTGTGCATATTGAGCTTTTGTTTACTTTGACAATAATATATCGTGTTGCTTAAGTGATGGTTATAAACTTATAATCATTCCCAAGATTA ATCTTTATTCTTTAATGATATGGTTTTGGACTATTCCATTACTCAAAACTAATAGATTTGTCTTCTACATTAAAAA
• Tissue: pods
• Gene name: LI_gene_170209;
• Additional information: details;

Expression of Ll_transcript_405822

FPKM

• PAB: 4
• PNAB: 10.1
• PS1: 10.5
• PS2: 9.1
• PS3: 9.7
• PW1: 11.2
• PW2: 9.3
• PW3: 6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_405822

• Blastp: Protein tesmin/TSO1-like CXC 2 from Arabidopsis with 44.52% of identity
• Blastx: Protein tesmin/TSO1-like CXC 2 from Arabidopsis with 44.13% of identity
• Eggnog: Tesmin TSO1-like CXC domain containing protein(ENOG4110UR5)
• Kegg: Link to kegg annotations (AT4G14770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422104.1)
• Pfam: Tesmin/TSO1-like CXC domain, cysteine-rich domain (PF03638.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;