| Id Trinity | TRINITY_DN49541_c0_g2_i19 |
|---|---|
| Name Transcript | Ll_transcript_406763 |
| Sequence | CAAGATAGTGTAGTTTACATCCCATGATTTTTTCTCACAAGTTTACTTGCTGCTTCCTCCTTTAAGTCTTCTTTTCATTTTCTTCTTACAGAATATACGA ATGATTTGGCTCGCCTAGAGAAGGAAAGGAACATACACCCTAGTCCAGAAATTGACGCATTTATGAAGGCATCATCTGTTGGTGGTAAAGCACAGTGTGA ACACGGACTACATTTTGAAAGTGCTTGGCCTTGATGTATGTTCAGAGACAATAGTTGGCAATGATATGCTAAGGGGTGTTTCCGGTGGCCAAAGAAAGAG AGTTACATCAGGAGAAATGATTGTTGGTCCAAGAAAAACACTATTTATGGATGAAATATCAACTGGACTTGATAGTTCTACAACGTTCCAGATAGTGAAA TGCATAAAGAATTTTGTTCATCAGATGGACGCTACAGTCCTCATGGCTCTCCTTCAGCCGGCTCCTGAAACATTTAACCTATTTGATGATCTGGTGCTTC TATCAGAAGGGCATGTGATATATCAAGGCCCTCTAGAAGATGTGCTCGTGTTTTTTGAGTCAGTTGGATTTAAACTTCCATCACGTAAGGGGATTGCAGA CTTTCTTCAGGAGGTGACTTCTAAAAAGGATCAAGCTCAATACTGGGCTGATCCTTCAAAACCATATCGATTTATCTCTGTTAGTGAGATTGCAGAAGCC TTCAGAAATTCCCGATTTGGAAGTTATGTGGAGTCCATGCAGGATCATCCATATGATAAATCAAAGGGTCACCCTTCAGCTTTGGCTAAAACTAAATATG CTGTGTCAAAGTGGGAGATCTCTAAGGCTTGCTTTGAACGAGAAGTTCTTTTGATAAAAAGGCATAGTTTTCTCTATATTTTTAGGACCTTCCAGGTTGC TTTTGTTGGATTTGTCACATGTACGATATTCCTGCGAACAAGGTTACATCCCACAGATGAGAGCAATGGGAATCTTTATCTTTCTGCTCTATTTTTTGGG CTTGTTCACATGATGTTTAACGGTTTTTCTGAGCTGCCTCTCATGATAACTCGGCTTCCAGTATTTTATAAGCAAAGAGATAATTTGTTCTATCCTGCAT GGGCTTGGTCTCTCTCCAGTTGGATTCTCCGTGTACCCTACTCTGTTATTGAGGCTGTTATTTGGACTGTTGTTGTATATTACACTGTCGGATTTGCCCC TTCAGCAGGAAGGTTTTTCCGCTACATGCTGGTACTTTTTGTAGTGCACCAAATGGCATTAGGTCTCTTTAGGATGATGGCTGCTATTGCACGGGATATG GTTCTTGCCAATACATTTGGATCAGCTGCACTGCTGGTTATATTCTTGTTGGGAGGATTTATTATCCCAAAAGGAATGATTAAGCCATGGTGGATCTGGG GATACTGGTTGTCACCCCTTACCTATGGACAACGCGCAATTACAGTTAATGAATTTACTGCTACAAGATGGCAGAAGAAATCAGCAACTGGGGACAACAC CATTGGTCACAATGTTCTCCATTCACACAGCTTACCAACTCAGGATGGTTGGTATTGGGGTGGTCTAGGAGTTTTGATCCTCTATGCACTTTTCTTCAAC AACATGGTCACTGTGGCCTTGGCCTATCTGGATCCACTACGAAAAGCTCGGACAGTTATTCCTCAAGATGATGAGCCAGAAAAGAAATCTACGAGAGACG TTAATAATCAGGGTACTGAATTGAGAAACAAGGGAAGAGAAGATACTAATGCAAAAGGAATGATTCTTCCATTTCAACCATTGACGATGACATTCCATAA CGTCAATTATTTTGTTGATATGCCAAAGGAGATAAGCAAGCAAGGCATACCAGAAACTAGGTTGCAGCTCTTGTCAAGTGTGAGCGGAGTTTTTTCACCA GGTGTCCTTACAGCATTAGTGGGATCTAGTGGGGCTGGGAAGACCACTTTGATGGATGTTCTTGCAGGGAGGAAAACCGGAGGGTATATTGAAGGGGACA TTAAAATATCTGGTTACCCAAAAGAGCAACGGACATTTGCCAGAATATCCGGATATGTTGAACAAAATGATATACATTCTCCTCAAGTAACTATTGAAGA GTCCCTATGGTTTTCGGCATCTCTTCGCCTTCCAAAGGAAGTCAGCATCGAAAAAAGACGTGAATTTGTTGAAGGGGTAATGAAACTAGTAGAGCTTGAT GCTCTGAGAAATGCATTGGTTGGTATGCCAGGTAGTTCTGGCTTATCAACAGAGCAGAGGAAGCGATTAACAATCGCAGTGGAGCTAGTAGCAAACCCTT CAATTATTTTTATGGACGAACCTACATCTGGACTTGATGCACGTGCAGCAGCAATTGTTATGCGAACTGTTCGTAATACTGTTGATACCGGAAGAACTGT GGTTTGCACCATACATCAACCAAGTATTGATATATTTGAAGCCTTTGATGAATTACTTCTTATGAAACGCGGGGGAAGAGTAATATATGGGGGAAAGCTT GGTGATCAGTCACAAATAATGATAGACTACTTTCAGAGAATCGGAGGAATCTCACGTATTCCAGATGGCTACAATCCAGCTACCTGGGTGCTTGAGGTTA CTACACCTGCTACTGAAGAGAGAATTGATGCCGATTTTGCAGATATTTATAAGAATTCTGACCAGTTCAGGGGGGTCGAAGCTAATATTTTGCAATTTGA ACATCCTCCTCCCGGCTCAGAACCACTGAAGTTTGACACCGTATATTCTCAAAACCTGATATCTCAATTTTTGTTATGCTTATGGAAACAAAATCTTGTG TACTGGAGAAGTCCACCATATAATGCCATGAGGATGTTCTTCACCTTAGTCAGTGCTTTGATATTTGGCACCGCATTTTGGGATGTTGGTTCAAAAAGGT CATCAACTCAAGATCTGATGGTGGTAATGGGAGCTCTTTATTCAGCATGCTTGTTTCTTGGGGTAAACAATGCTTCTTCGGTTCAACCAATTGTTTCAAT AGAAAGGACAGTGTTTTATAGAGAGAAGGCAGCTGGAATGTATTCCCCAATTGCATATGCGGCTGCCCAGGGGCTTATAGAGGTACCATACATTGCAGTT CAGACAATATTATTTGGCATAATTACATATTTCATGGTCAATTTTGAAAGGACAGCTGGAAAGTTCCTTCTATATCTTGTGTTTATGTTCCTAACCTTCA CCTACTTCACCTTTTACGGCATGATGGCTGTCGGTCTTACTCCGTCCCAACATCTGGCAGCTGTTATTTCTTCAGCGTTTTATTCTCTGTGGAATCTTCT TTCAGGTTTTCTGATTCCAAAATCGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_170243; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_406763
| Blastp | ABC transporter G family member 31 from Arabidopsis with 77.13% of identity |
|---|---|
| Blastx | ABC transporter G family member 31 from Arabidopsis with 77.28% of identity |
| Eggnog | (ABC) transporter(COG0842) |
| Kegg | Link to kegg annotations (AT2G29940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456848.1) |
| Pfam | ABC-2 type transporter (PF01061.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |