Id Trinity | TRINITY_DN49541_c0_g2_i8 |
---|---|
Name Transcript | Ll_transcript_406751 |
Sequence | TACTTTGTGCACTCGCGGGCAAGCTTGATAGCAACCTGAAGAAAAATGGTATTATAACATACAATGGCACTGAGCTAGACGACTTCCATGTGAAAAGGAC TTCTGCATACATTAGCCAAACCGATAACCACATTGCAGAATTAACAGTACGAGAAACTTTTGACTTTGCTGCTAGATGTCAAGGTGCAAAAGAAGGTTTT GCAGAATATACGAATGATTTGGCTCGCCTAGAGAAGGAAAGGAACATACACCCTAGTCCAGAAATTGACGCATTTATGAAGGCATCATCTGTTGGTGGTA AAAAGCACAGTGTGAACACGGACTACATTTTGAAAGTGCTTGGCCTTGATGTATGTTCAGAGACAATAGTTGGCAATGATATGCTAAGGGGTGTTTCCGG TGGCCAAAGAAAGAGAGTTACATCAGGAGAAATGATTGTTGGTCCAAGAAAAACACTATTTATGGATGAAATATCAACTGGACTTGATAGTTCTACAACG TTCCAGATAGTGAAATGCATAAAGAATTTTGTTCATCAGATGGACGCTACAGTCCTCATGGCTCTCCTTCAGCCGGCTCCTGAAACATTTAACCTATTTG ATGATCTGGTGCTTCTATCAGAAGGGCATGTGATATATCAAGGCCCTCTAGAAGATGTGCTCGTGTTTTTTGAGTCAGTTGGATTTAAACTTCCATCACG TAAGGGGATTGCAGACTTTCTTCAGGAGGTGACTTCTAAAAAGGATCAAGCTCAATACTGGGCTGATCCTTCAAAACCATATCGATTTATCTCTGTTAGT GAGATTGCAGAAGCCTTCAGAAATTCCCGATTTGGAAGTTATGTGGAGTCCATGCAGGATCATCCATATGATAAATCAAAGGGTCACCCTTCAGCTTTGG CTAAAACTAAATATGCTGTGTCAAAGTGGGAGATCTCTAAGGCTTGCTTTGAACGAGAAGTTCTTTTGATAAAAAGGCATAGTTTTCTCTATATTTTTAG GACCTTCCAGGTTGCTTTTGTTGGATTTGTCACATGTACGATATTCCTGCGAACAAGGTTACATCCCACAGATGAGAGCAATGGGAATCTTTATCTTTCT GCTCTATTTTTTGGGCTTGTTCACATGATGTTTAACGGTTTTTCTGAGCTGCCTCTCATGATAACTCGGCTTCCAGTATTTTATAAGCAAAGAGATAATT TGTTCTATCCTGCATGGGCTTGGTCTCTCTCCAGTTGGATTCTCCGTGTACCCTACTCTGTTATTGAGGCTGTTATTTGGACTGTTGTTGTATATTACAC TGTCGGATTTGCCCCTTCAGCAGGAAGGTTTTTCCGCTACATGCTGGTACTTTTTGTAGTGCACCAAATGGCATTAGGTCTCTTTAGGATGATGGCTGCT ATTGCACGGGATATGGTTCTTGCCAATACATTTGGATCAGCTGCACTGCTGGTTATATTCTTGTTGGGAGGATTTATTATCCCAAAAGGAATGATTAAGC CATGGTGGATCTGGGGATACTGGTTGTCACCCCTTACCTATGGACAACGCGCAATTACAGTTAATGAATTTACTGCTACAAGATGGCAGAAGAAATCAGC AACTGGGGACAACACCATTGGTCACAATGTTCTCCATTCACACAGCTTACCAACTCAGGATGGTTGGTATTGGGGTGGTCTAGGAGTTTTGATCCTCTAT GCACTTTTCTTCAACAACATGGTCACTGTGGCCTTGGCCTATCTGGATCCACTACGAAAAGCTCGGACAGTTATTCCTCAAGATGATGAGCCAGAAAAGA AATCTACGAGAGACGTTAATAATCAGGGTACTGAATTGAGAAACAAGGGAAGAGAAGATACTAATGCAAAAGGAATGATTCTTCCATTTCAACCATTGAC GATGACATTCCATAACGTCAATTATTTTGTTGATATGCCAAAGGAGATAAGCAAGCAAGGCATACCAGAAACTAGGTTGCAGCTCTTGTCAAGTGTGAGC GGAGTTTTTTCACCAGGTGTCCTTACAGCATTAGTGGGATCTAGTGGGGCTGGGAAGACCACTTTGATGGATGTTCTTGCAGGGAGGAAAACCGGAGGGT ATATTGAAGGGGACATTAAAATATCTGGTTACCCAAAAGAGCAACGGACATTTGCCAGAATATCCGGATATGTTGAACAAAATGATATACATTCTCCTCA AGTAACTATTGAAGAGTCCCTATGGTTTTCGGCATCTCTTCGCCTTCCAAAGGAAGTCAGCATCGAAAAAAGACGTGAATTTGTTGAAGGGGTAATGAAA CTAGTAGAGCTTGATGCTCTGAGAAATGCATTGGTTGGTATGCCAGGTAGTTCTGGCTTATCAACAGAGCAGAGGAAGCGATTAACAATCGCAGTGGAGC TAGTAGCAAACCCTTCAATTATTTTTATGGACGAACCTACATCTGGACTTGATGCACGTGCAGCAGCAATTGTTATGCGAACTGTTCGTAATACTGTTGA TACCGGAAGAACTGTGGTTTGCACCATACATCAACCAAGTATTGATATATTTGAAGCCTTTGATGAATTACTTCTTATGAAACGCGGGGGAAGAGTAATA TATGGGGGAAAGCTTGGTGATCAGTCACAAATAATGATAGACTACTTTCAGAGAATCGGAGGAATCTCACGTATTCCAGATGGCTACAATCCAGCTACCT GGGTGCTTGAGGTTACTACACCTGCTACTGAAGAGAGAATTGATGCCGATTTTGCAGATATTTATAAGAATTCTGACCAGTTCAGGGGGGTCGAAGCTAA TATTTTGCAATTTGAACATCCTCCTCCCGGCTCAGAACCACTGAAGTTTGACACCGTATATTCTCAAAACCTGATATCTCAATTTTTGTTATGCTTATGG AAACAAAATCTTGTGTACTGGAGAAGTCCACCATATAATGCCATGAGGATGTTCTTCACCTTAGTCAGTGCTTTGATATTTGGCACCGCATTTTGGGATG TTGGTTCAAAAAGGTCATCAACTCAAGATCTGATGGTGGTAATGGGAGCTCTTTATTCAGCATGCTTGTTTCTTGGGGTAAACAATGCTTCTTCGGTTCA ACCAATTGTTTCAATAGAAAGGACAGTGTTTTATAGAGAGAAGGCAGCTGGAATGTATTCCCCAATTGCATATGCGGCTGCCCAGGGGCTTATAGAGGTA CCATACATTGCAGTTCAGACAATATTATTTGGCATAATTACATATTTCATGGTCAATTTTGAAAGGACAGCTGGAAAGTTCTTTCTATATCTTGTGTTTA TGTTCCTAACCTTCACCTACTTCACCTTTTACGGCATGATGGCTGTCGGTCTTACTCCGTCCCAACATCTGGCAGCTGTTATTTCTTCAGCGTTTTATTC TCTGTGGAATCTTCTTTCAGGTTTTCTGATTCCAAAATCGGTGAGTCATGCCATACTTGCAAAAACAACAGTTTAGTTTCGGTTCTTTTTCCCTTTTTAC TAGTTCTTGTAACACATAAAACATAATAGTAAATGAATTAATACAGTGCTGAAGATTATACTGGCTTTGCCTTAATTAAAGTCGTTTTCCCGTGGCCAAT TACTTAAACATATCACACATCATAGTTAGATATTTAACATCAAGAATATTGTTGATACTGTAGCACAAAATCTTACAGCTGGAATTCATGATTTAACTAC AACTTTAGGGTGGGTACTGGGTAAGGTTTAGAGTAACATATCCCTTATTCTCGTTAATGCTGTCATTAGTGAATTGTTTTTTATATATGCTATTCTATGC TCTAAGTAAAGAGCATTGTCAATTGATTTCCATTATTTTACATGTATTGCTGCCAGCCAAATTCATTTTTGTTTCATGGTGTTTTTTAAACAAATGAAGG TTTATATTTCATTGACGGGTTCTAATGGCCGTTACTCTTGCTATGTTTCAGAGTATTCCAGGATGGTGGATTTGGTTCTACTATATCTGCCCGGTTTCAT GGACGTTACGTGGCATTATCACGTCTCAACTTGGTGATGTCGAGAACATAATTGTAGGACCTGGATTCAAAGGCACTGTGAAAGAATATTTAGCTTTTAG CCTGGGATATGAACATACAGTCAATGGATTTTCATCTGTGGGGCTTTCAGTAATAGTGCTTATTGGATTCGTTCTCCTCTTCTTTGGTTCTTTTGCTGTA TCAGTCAAAGTTCTAAATTTCCAGAAGAGATGAGCGGGTGATTTTGTTTGAAAAGATGGGACAAGCAGCTACTCTTTGACATCATAGTAGATGATTCCTG ACATTGAGTGAAATGGTGGGTTTGGATAGCCATGTCCAGATATGGTGCTTGTGGGAATCATAGCTGCATGGGATGACCAGGTTTGATGTAGCTGATGAGG TCTTTTTTCTGTCCAATTCCTATGACTATAGGAATTCCAATTTTTAAGGCAAATAAGATGGCAATTGATTAGAGATAGTATTTGAACATCATCAATTGCA CCACTCTCAAAGAACAAAGTACTATTTTTCTTTGGTAAATCACATACATGGGAAGAATGAAGATACTATGTCCTTGTTTGTGTCCTAATTGATGTACCAT ACCAATTAAAATACATCATTTAATTAAATAGAAAAGTCATAAATAAATAATTATATTACTTGATGTAATTTGATTGGATAAAGACAAAGAGACACAAGGT TTTTTGGAGACAGATGATCTGGATTTACAAGGAAGTGCTAGACAATATTATCTCCATTTTGGAATAGGTATGGGTTTAGATGGAAGTGGTG BLAST |
Tissue | pods |
Gene name | LI_gene_170243; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_406751
Blastp | ABC transporter G family member 31 from Arabidopsis with 76.81% of identity |
---|---|
Blastx | ABC transporter G family member 31 from Arabidopsis with 77.47% of identity |
Eggnog | (ABC) transporter(COG0842) |
Kegg | Link to kegg annotations (AT2G29940) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456848.1) |
Pfam | ABC-2 type transporter (PF01061.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |