Ll_transcript_404980

• Id Trinity: TRINITY_DN49547_c0_g1_i3
• Name Transcript: Ll_transcript_404980
• Sequence: AGCTAATCATTTTCACGACTGTACAACAACCGAAGAAAAAGGAAGGAATATGGAGATCAAAGCTGGTTTGTCAGCACTTGTCACTGGCGCTGCTTCTGGA ATCGGGAAGAGTCTTGTCCTAGCTCTTGCAGAGAAGGGTATATTTATCACACTTGTTGATTTCTCTGAAGAAAAGGGAAGAGAACTTGCAGCCCTTGTTC AGGAAATTAATACCAAGTTTCATCCCAACTTAGATTTTCCATCTGCTTTGTTTTTTAAATGTGATGTCACTAACTCAAGAGACCTAGCTGCTGCGTTCGA AAAGCATTATTTGACATATGGAGGACTAGACATTTGTATTAACAGTGCAGGGATTTCTAATCCTATAGAATTCCATAAGGACCAAACAGATGGCACTCGT TCATGGAAGCACACTGTTAATGTGAATTTCACTGCTGTTATTGAATGCACTCGTCTCGCGATTAAAACCATGGAAGCTGCCAAAAGGCCTGGTGCGATTA TCAATCTGGGTTCTGCTTCTGGTCTTTATCCAATGTATTTCGATCCTATCTATTCGGCCTCTAAAGGTGGTGTTGTTATGTTTACTAGAGCTCTACGTCT ATACAAACGTCAAGGAATTCGAATCAACGTGCTTTGCCCTGAATTTATTGAAACTGAGATGGGCAAGAAGGTGGATCCTAGATTTGTCAGTTGGATGGGG GGCTTTGTACCTATGGAACTGTTGATAAAAGGTGCTTTTGAGCTCATCACGGATGAGAGTAAAGCTGGTCATTGCCTATGGATAACAAATCGTCGAGGTT TGGAGTACTGGCCCACCCCATCAGAGGAAGCAAAGTACTTGACAAGTTCCGTCTCACGTTTGAGGCAAAGATCCGAATTCAAAGCTCCATCAGTTAAACT CCCTGATAGTTTTGAGAAAATAGTTGTTCAGATCTTGTCTCACAACTTTCGGCATGCTACCACCATCGTGAGAACACCACTGGGATTACCTGTAAAACCA AAGCACGTTGTTGTGAAGATAATTCATGCTGGTGTAAATGCTAGTGATGTAAATTTTAGTTCAGGCCGCTATTTCGGTGGCAACAACAGTGATACTGCTT CTCGTCTTCCATTTGATGCAGGATTTGAGGCTGTAGGAATAATTGCCGCAGTTGGGGAATTTGTCACAGACTTGAAAGTTGGTATGCCTTGTGCATTCAT GACTTTTGGAGGTTATGCTGAATTCATAACGATTCCTTCAAAATTTGCCCTTCCAGTGGCTAGACCAGATGCAGAAGTTGTTGCCATGCTTACATCAGGA TTAACAGCCTCAATTTCTCTAGAAAAGGCAGGAGCAGCACAGATAGAATCTGGAAAAGTGGTCCTTGTTACTGCTGCTGCAGGGGGAACTGGGCAATTTG CTGTTCAGCTTGCAAAACTAGCAGGGAATACAGTGGTTGCAACTTGTGGAGGTGGGGCAAAGGCCAAGCTTCTTAAAGAATTGGGAGTTGACAGAGTCAT AGACTATCATAATGAAGATATAAAAACAGTTCTAAGGAAAGAGTTCCCAAAAGGTATCGACGTTATCTACGAGTCTGTTGGTGGTGACTTGTTAAAGTTG TGCTTGAATGCGTTGGCAGTCCAAGGACGACTCATTGTTATTGGCATGATTTCTCAGTATCAAGGAGATAGTGGTTGGACACCATCAAACTACCCTGGAT TATTGGAGAAGCTCTTGGCCAAGAGTCAAACTGTGGCTGGCTTTTTCTTGGTGCAATATGCTCACTTGTGGCAAGAACATCTTGACAAACTATTTAATCT TTACTCTACTGGGAAGCTAAAGGTTGCTGTCGATCCGAAGAAATTTGTTGGCCTGCGTTCTGTTGCAGATGCTGTAGAGTATCTGCATTCCGGAAAAAGT GTTGGGAAGGTTGTTGTCACTGTGGACCCTGCTTTCCATCCTCAAGTGGCCAAATTGTGAGTCAAAACATGTCAAATTAGCTTTTACACAAATGATATTC AATCAAATTCAAATGCAGAAAGGAGAACTTAAGCATGCATGCAGCTATGCTCCAAAGATTCAAATGCTGAATTATTCTCATTTTTTGGGGGCTAATTATG CCATTGTTAGGTGTTAGAAATAAGTCAAAAAAACGGAATAAGGTTTATGATGTTTATTGCTTACACTATAAAGCATCTATAATGTCCATGAAGTGGTGAA CAATTATCTGTTTTGAACCATACTGAAAAATCAAGTCTTATCCTTTATTTGCCTTGAAACTTAGTAAGTAGAAACAATTAGTCAAGTGATTCTAATTTGG CACTCCATCTTCATAATAAGGCCTTGCCTCTTGTATTCGGTAGCATGGTCCACCACCTCATTCAAGATAAGAACCTCATCAAATATTTGCATCCAGAAAT AAAAGCACG
• Tissue: pods
• Gene name: LI_gene_170271;
• Additional information: details;

Expression of Ll_transcript_404980

FPKM

• PAB: 11
• PNAB: 8.8
• PS1: 16.2
• PS2: 8.2
• PS3: 14.7
• PW1: 7
• PW2: 9.6
• PW3: 9.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404980

• Blastp: Prostaglandin reductase-3 from Mus with 43.77% of identity
• Blastx: Prostaglandin reductase-3 from Bos with 44.97% of identity
• Eggnog: alcohol dehydrogenase(COG2130)
• Kegg: Link to kegg annotations (225791)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422170.1)
• Pfam: short chain dehydrogenase (PF00106.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;