Ll_transcript_404982

• Id Trinity: TRINITY_DN49547_c0_g1_i5
• Name Transcript: Ll_transcript_404982
• Sequence: AGCTAATCATTTTCACGACTGTACAACAACCGAAGAAAAAGGAAGGAATATGGAGATCAAAGCTGGTTTGTCAGCACTTGTCACTGGCGCTGCTTCTGGA ATCGGGAAGAGTCTTGTCCTAGCTCTTGCAGAGAAGGGTATATTTATCACACTTGTTGATTTCTCTGAAGAAAAGGGAAGAGAACTTGCAGCCCTTGTTC AGGAAATTAATACCAAGTTTCATCCCAACTTAGATTTTCCATCTGCTTTGTTTTTTAAATGTGATGTCACTAACTCAAGTAAGTTGGAATTTCCTGCTTA TTAAAACTTTAGGTAGCTGTTTCGCGGACTTGTTAGAACATGACGAATTATGAAAAAATATATAAGATCAATTGTACGTGATGTTTTAAATTATGGTTGT GGCTATTGCGATGTGACAACATGATATTTTTTGTGATTAAATTTTTTTTTGAATTTGACGCGAACTAATGCAGTTGCGTTGTGTCCCAATGCACGACCAC ATCATGAAGATTTTGTATCACATCACAATTGTGTGGTATTGTGATTATGGAGGTCTCTACAAGACTACAACCACATTTTGCCTCATCAGGTGATGTAGTC TGCAGTTAGACATAGTGCACAGAATACTACACAAGACATTTTGGTTCAATTAACAAAGGTGGGAACTAAAGAGAACAAATATTCTATCCCCGGGTCAAAC GTTACCCGCTGACCAGCGTTGTCATTTTGTTTAGTGAAGCAGCATCACTTAACAGAAAAGGAGGCAATTAATAAAGTTTCTTAATCATTGGCATGTATTT GTTTCTTCCTTATGTTCTAACTATCATGAAGTAGTATAATATAAACATATGAAATATGAATGCCATAAATCACTAAAAGCACATGCTATTTTGATTGTCC TTACTGTACACCGATGTATTAACTTACAAACATCAACAGGAGACCTAGCTGCTGCGTTCGAAAAGCATTATTTGACATATGGAGGACTAGACATTTGTAT TAACAGTGCAGGGATTTCTAATCCTATAGAATTCCATAAGGACCAAACAGATGGCACTCGTTCATGGAAACACACTATTAATGTGAATTTCACTGCTATT ATTGAATGCACTCGTCTTGCGATTAAAACCATGGAAGCTGCCAAAAGGCCTGGTGTGATTATAAATATGGGTTCTGCTTCTGGTCTTTATCCAATGTATG ATGATCCTCTCTATTCGGGCTCTAAAGGTGGTGTTGTTATGTTTACTAGATCTCTTCGTCTATACCAACGCAAAGGAATTCGAATCAATGTTCTTTGCCC TGAGTTTATTGAAACTGAGATGGGCTTAAGGGTGGATTCCAAATTTATCAATTTGACAGGGGGCTTTATACCTATGGAAATGTTGGTAAAAGGTGCTTTT GAGCTCATTACGGATGAGAGTAAAGCTGGTCATTGCCTATGGATTACAAATCGTCGAGGTCTGGAGTACTGGCCCACCCCATCAGAGGAAGCGAAGTACT TGACAAGTTCCGCCTCACGTTTCAAGAAAAGATCCGAATTCAATGCTCCACCAATTAAAATCCCCGAGAGTTTTGAGAAAATAGTTGTTCAGACCTTGAC TCACAACTTTCGGAATGCTACCACGACAGTGAGAGCACCACTGAGATTACCTGTCAAACCAAAGCACGTCCTGGTGAAGATAATTTATGCTGGCGTAAAT GCTAGTGATGTAAATTTTAGTTCAGGCCGCTATTTCGGTGGCAACAACAGTGACACTGCATCTCGTCTTCCATTTGATGCAGGATTTGAGGCTGTAGGAA TAATTGCCGCAGTTGGGGATTCTGTCACAGATTTGAAAGTTGGTATGCCTTGTGCATTCATGACTTTTGGAGGTTATTCAGAATTCATAATGATTAATTC AAAACACGCCCTTCCAGTGCCTAGACCGGATGCAGAAGTTGTTGCTATGCTGACATCAGGATTAACAGCCTCAATTGCTCTAGAAAAGGCAGGAGCAGCA AAAATGGAATCCGGAAAAGTGGTTCTTGTTACTGCTGCTGCAGGAGGAACTGGGCAATTTGCTGTTCAGCTTGCAAAATTAGCCGGAAATACAGTGATTG CAACATGTGGAGGTGGGGCAAAGGCCAAGCTTCTGCAAGAATTGGGAGTTGACAGAGTCATAGACTATCATAGTGAAGATATAAAAACTGTTCTAATGAA AGAGTTCCCGAAAGGTATTGACGTCATCTACGAATCTGTTGGTGGTGACATGTTAAACTTGTGCTTGAATGCTTTGGCAGTCCATGGACGGCTCATTGTC ATTGGCATGATTTCTCAGTATCAAGGAGATAGTGGTTGGACGCCATCAAAGTACCCTGGATTATTAGAGAAGCTCTTGGCGAAGAGCCAAACTGTGGCTG GATTTTTCTTGGTGCAATATGGTCACTTTTGGCAAGAACATCTCGACAAACTATTTAATCTTTACTCTAAGGGAAAGCTAAAGGTTGCTGTTGATCCAAA GAAATTCAATGGCCTGCATTCTGTTGCAGATGCTGTAGAGTATCTGCATTCAGGAAAAAGTGTTGGGAAGGTTGTTGTCTGTGTGGACTCTTCTTTCCAT CCTCAAGTGGCCAAATTGTGAGTCAACACATGTCAAGTGACCTTACACAAATGATATTCCATCAGTTTCAAATGCAGAAAAGAGAACTTAAGCATGCAGC TCTTCTCCAAAGATTCTAGTGGAATGTTGTTGAAAATAGTTGCATAAGATCAAATCCCACTCTAGTGCTGAATTATTGTCATTTTCTTGGGGCTAATCAT GTGATTGTGAGTGTTAGAAATAAATAAGAAAGTGGAATAAGATTTATGATGTTTAAGTTTACAGTAATAAACTAATAATAATGCATCTTTCATGTCCATG ATTGAAGTAGTGGACAATTATCTGTTTTGAACCTTACTGAAAACTTATGAGCCTATCCTTTATTTGCCTTATTGGTCAAGTGATTGCTGATTCCGTAC
• Tissue: pods
• Gene name: LI_gene_170271;
• Additional information: details;

Expression of Ll_transcript_404982

FPKM

• PAB: 3.9
• PNAB: 10
• PS1: 11
• PS2: 5.4
• PS3: 10.8
• PW1: 7.9
• PW2: 8.7
• PW3: 6.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404982

• Blastp: Prostaglandin reductase-3 from Mus with 44.32% of identity
• Blastx: Prostaglandin reductase-3 from Bos with 45.27% of identity
• Eggnog: alcohol dehydrogenase(COG2130)
• Kegg: Link to kegg annotations (225791)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424213.1)
• Pfam: short chain dehydrogenase (PF00106.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;