Ll_transcript_406119

• Id Trinity: TRINITY_DN49549_c0_g1_i14
• Name Transcript: Ll_transcript_406119
• Sequence: GAAAAACGCAAGGCATATCCATTATTTTTATTCCATGCGTAAGAGATGGTTATTGTTGTTATTATTATTATCATTAGTGAGGAACAGAAAGAAAAGCGTG ACCCTTCCCTGACAGAAGAAACGATGCCGGAGGAAACGACGGCGATTGACTACGTCATGGAGGCTGCTTCCGGTCCTCACTTCTCCGGCCTCCGTCTTGA CGGCCTCCTCTCATCTCCACCTTCTTCTCCTGCTCATCATTTCTCTTCTTCTTCTCTCTCCCCTGATTCTCTTCCAATTCAACCTTTCATTATAGGAGTT TCGGGAGGTACTGCTTCGGGAAAGACTACAGTGTGCGATATGATCATTCAGCAACTCCACGATCACCGCGTTATACTCGTCAATCAGGATTCATTTTATC GCGGTTTAACTCCTGAAGAATTGAAGCGTGTTCATGAGTACAATTTTGATCATCCTGATGCTTTTGACACTGCACAGATGCTAGAGTGTGTGGGAAAGCT GATAAGTGGCCAAAGCGTCCAAGTTCCCATTTATGACTTTAAGAATCATCAGCGATCTTCTGAAAATTTTCGGCAGGTCAATGCTTCTGATGTTATTATA TTGGAGGGAATTCTTGTATTCCATGACCAAAACTTACGGGATCTGATGAACATGAAGATCTTTGTTGATGCAGATGCTGATGTGAGGCTTGCTCGTAGGA TTAGACGTGACACAGTGGAGAGGGGCAGGGATATAAACTCTGTTCTCGAACAGTATGCGAAGTTTGTTAAGCCAGCCTTTGATGATTTTGTTTTACCATC AAAGAAGTATGCTGATGTGATCATTCCTCGAGGAGGTGATAATCATGTTGCTATTGATTTGATTGTGCAGCATATTCGCACAAAGCTTGGTCAACATGAT CTATGCAAAATATATCCAAACATTTATGTTATTCAGTCAACATTCCAGATAAGGGGAATGCATACATTGATTCGTGACCAAGACATATCAAAGCATGATT TTGTATTTTATTCAGATCGGCTTATACGACTGGTTGTTGAGCATGGCCTAGGTCATCTCCCATTC
• Tissue: pods
• Gene name: LI_gene_170278;
• Additional information: details;

Expression of Ll_transcript_406119

FPKM

• PAB: 59.4
• PNAB: 6.7
• PS1: 3.2
• PS2: 0.8
• PS3: 1.1
• PW1: 12.7
• PW2: 18.9
• PW3: 17.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_406119

• Blastp: Uridine kinase-like protein 2, chloroplastic from Arabidopsis with 81.37% of identity
• Blastx: Uridine kinase-like protein 1, chloroplastic from Arabidopsis with 81.06% of identity
• Eggnog: Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (By similarity)(COG0035)
• Kegg: Link to kegg annotations (AT3G27190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447447.1)
• Pfam: Phosphoribulokinase / Uridine kinase family (PF00485.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;