| Id Trinity | TRINITY_DN49549_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_406109 |
| Sequence | GAAAAACGCAAGGCATATCCATTATTTTTATTCCATGCGTAAGAGATGGTTATTGTTGTTATTATTATTATCATTAGTGAGGAACAGAAAGAAAAGCGTG ACCCTTCCCTGACAGAAGAAACGATGCCGGAGGAAACGACGGCGATTGACTACGTCATGGAGGCTGCTTCCGGTCCTCACTTCTCCGGCCTCCGTCTTGA CGGCCTCCTCTCATCTCCACCTTCTTCTCCTGCTCATCATTTCTCTTCTTCTTCTCTCTCCCCTGATTCTCTTCCAATTCAACCTTTCATTATAGGAGTT TCGGGAGGTACTGCTTCGGGAAAGACTACAGTGTGCGATATGATCATTCAGCAACTCCACGATCACCGCGTTATACTCGTCAATCAGGATTCATTTTATC GCGGTTTAACTCCTGAAGAATTGAAGCGTGTTCATGAGTACAATTTTGATCATCCTGATGCTTTTGACACTGCACAGATGCTAGAGTGTGTGGGAAAGCT GATAAGTGGCCAAAGCGTCCAAGTTCCCATTTATGACTTTAAGAATCATCAGCGATCTTCTGAAAATTTTCGGCAGGTCAATGCTTCTGATGTTATTATA TTGGAGGGAATTCTTGTATTCCATGACCAAAACTTACGGGATCTGATGAACATGAAGATCTTTGTTGATGCAGATGCTGATGTGAGGCTTGCTCGTAGGA TTAGACGTGACACAGTGGAGAGGGGCAGGGATATAAACTCTGTTCTCGAACAGTATGCGAAGTTTGTTAAGCCAGCCTTTGATGATTTTGTTTTACCATC AAAGAAGTATGCTGATGTGATCATTCCTCGAGGAGGTGATAATCATGTTGCTATTGATTTGATTGTGCAGCATATTCGCACAAAGCTTGGTCAACATGAT CTATGCAAAATATATCCAAACATTTATGTTATTCAGTCAACATTCCAGGTATCTAAGAACATTATTCGCAAAATATTTTTCATTTGTATTAATTGAGTAT TTGTGGAAAATCATGTGATTGTATTTGCTACCACCCAAACAAACTGGATTAACTTTATGAAGCATTTTATAGATCGTTTAGATTACAATTTTTATTCTTC CTAAATTTGAAAAGAAAAAAAATGTTCTTAAGTTTTTGCCTATTTGTGAGTCATGGGAAGTACATGATAATGGCATGCCGAAACAATAACATCTCCATAT CTTATGTTTTGTACTTCCAATTGTAATTTCAATGTAACAAAAGTGCTCATTATATTGTGACCAAGAAAGAAGCAATATATTTGATAAGACATGGAGATCA GTCGATATTTTATATTTAATTTCGATATATAATCAAGGTGGTGAAAAAACTGGACATCTGTGATAAACCATGTTCGCAAGCCGTAGTGTGTCATTATATA AATGATACAAATGCGCAGACTTTGGTACACTAAGGGGGAATGGAATATCCCTTCTAAAAGTAAGGAAGATAACTTGTTTAGTATGCCTTCATAATTTTTT CTGCTGTCTTCTGTTGACAGGCTACAAGCTGATATCTTGGATCTGTGCCATCTATATTTAGTTCTTTATTGGTTGTGCTTATATATTTCAGATAAGGGGA ATGCATACATTGATTCGTGACCAAGACATATCAAAGCATGATTTTGTATTTTATTCAGATCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_170278; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_406109
| Blastp | Uridine kinase-like protein 2, chloroplastic from Arabidopsis with 79.23% of identity |
|---|---|
| Blastx | Uridine kinase-like protein 1, chloroplastic from Arabidopsis with 78.87% of identity |
| Eggnog | Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (By similarity)(COG0035) |
| Kegg | Link to kegg annotations (AT3G27190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447447.1) |
| Pfam | Phosphoribulokinase / Uridine kinase family (PF00485.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |