Id Trinity | TRINITY_DN49557_c0_g1_i4 |
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Name Transcript | Ll_transcript_405411 |
Sequence | CTAAAAACCCTAATCCCCAATATATTATCACACTGGAAACTCTATGAAACGCTGCGCACAAAGTTAGGGTTTTCGGAGAGAGAGAGAGACGGAGAGAGGG CCAATTTCTACGAAGAACAAAAAATGGCGACTGCACCCGCACTCGAACAAGTCCAGTGCTTCGGCCGCAAGAAAACCGCCGTCGCCGTCACTTACTGCAA GCGCGGTCGCGGCCTGATCAAGATCAACGGAAGCCCAATCGAGTTGGTCGAACCGGAAATCCTCCGGTTCAAGGCATTCGAACCGATCCTCTTGTTGGGA AAATCTCGGTTCGCTGGCGTTGACATGAGAATCCGCGTGAAGGGTGGAGGACACACTTCCCAGATCTACGCCATAAGGCAAAGCATTGCAAAGGCACTCG TCGCGTTTTACCAGAAGTATGTTGATGAACAGAGCAAGAAGGAGATCAAGGACATTCTTGTCAGGTATGATCGTACTTTGCTTGTAGCTGATCCAAGGCG CTGTGAGCCTAAGAAGTTCGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAGTCTTACCGTTGAAGAAGGAAAAGAGAATGTGTTTTTTGGTCTTTTGGT TTTCGGTTCATGTTTTATGCTGTGGAAAACCTTTGTTATTTTCGGCATTTTTGCTTTAATTATTATCGAATGCTTTGTTATTTTAATTGAACCTGTTTTA TTTAGATATGTTTGCAATTTGCAGGCATCATATAAGGTTATCTTATTTTCACTTTAAAATCTCAGTATCTTAGGTTTGTGCTTATGCTTGCTCCTTAATG TGTATTCCATATAGTATCCTGAGGGTATTGGAATCTGTTAGTGCACTCGTTTGTTAATTTCATGTTTATTTGCAATTACGTTAGGTTTAAATACAATTGG AAATAGGGTAGCTGTACATTAGGGATTCAGTTCAACTCTATCAACCTATGATTTTGGGATTAGAGTTCTTTTTTACTTCTACTCTCATGGTATTTAGAGA T BLAST |
Tissue | pods |
Gene name | LI_gene_170338; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_405411
Blastp | 40S ribosomal protein S16-1 from Arabidopsis with 88.36% of identity |
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Blastx | 40S ribosomal protein S16-1 from Arabidopsis with 88.36% of identity |
Eggnog | 30S ribosomal protein S9(COG0103) |
Kegg | Link to kegg annotations (AT2G09990) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422309.1) |
Pfam | Ribosomal protein S9/S16 (PF00380.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |