Ll_transcript_406581

• Id Trinity: TRINITY_DN49567_c0_g4_i3
• Name Transcript: Ll_transcript_406581
• Sequence: TGAAAATTTTAAGAAACAAATACACGTGGCGTGTTATTAGTGAACTCATTGGATTGTGGCCTTAGAACCACTTCACAAAATCTTCATACATTCAGAACCT CTCATCCTATTCCAAAGTCTTTAACTTGCTAAGTACAAGTGAAAGCATCAAAAGATGATGCTATTGTTCACAATAACTCATAGCAGAAACTAGCATACCC CAAAGTTGCCATAACCATAACCATAACCATGTCACTATCTACCACTACTAGTGGCCACTCATCTCTTTATTCTGCACTTACATTACCAAGAACCACTATA ATCCACAACAAACTCTTTTCTCCAACAACCAAGTTCTATTCTTCAAGAAACCACACATATTCTGGTGTTTCATCTTGTTTCTCAAATACCCTTTTGTTAA AAAAGTTTCCTTTTGTGGTTAGAGCTTCTTCTTCTTCATCATCTGAGGTTGGGTCAGAAGCTTCTAAACAGGAAAATGGTGAAAAGAGTGAAGGAGGAGA GGAGTCATATGAAGAATATGAGGTTGAGATAGAGCAGCCTTATGGACTCAGGTTTGTGAAGGGAAGAGATGGTGGAACATACATTGATGCTATTGCACCA GGTGGATCAGCTGATAAGGTTGGAGTGTTTAGTGTTGGGGATAAAGTACTTGCTACCAGTGCAGTTTTCGGGACTGAAATTTGGCCAGCTGCAGAATATG GAAGGACAATGTACACAATTCGCCAGAGAGTTGGACCATTACTCATGAGAATGCAGAAGAGATACGGAAAGATTGATACCTCGGGTGCGTTGACTGAAAA GGAGATTATCAGAGCTGAGAGGAACTCTGGTGTAATCAGTAATAGAGTGAGGGAAATTCAGATGCAAAACTACTTGAGGAAAAGGGAACAGAAAGAGAGC AGAGAAAGGGATTTGCGAGAAGGATTAGTTCTATATAGGAATGCCAAATATGAGGAAGCACTAGAGAAATTTGAGTCTGTTTTGGGAACAAAGCCGGAAC CTGAAGAAGCAGCAGTTGCAAGTTACAATGTTGCTTGTTGTTACTCTAAGCTAAACCAGATTCAAGCCGCACTATCTTCGCTCGAAGAAGCTCTGAATGC TGGCTTTGAAGACTTTAAGAGAATCAGAACTGATCCTGACCTTGCCAATGCAAGGGCGTCGGAGGAATTCGATCCACTAGTGAAAAGATTCGACGAATCA TTTATCAACGAGAATGCCATCAATGCTATTAAATCACTTTTTGGCTTTGGTAAGAAGAAATAACCAAGGATCAAGAACAAGTAGTTGCTTGCTTGAGCAA CATTATATTATGGCATTTTTTATTTCCCAATGTATAAATTTATAGTTAACTACAGGACCCTTATTGTCTTCTGCTATTCAATTTTTTACCCTTCCACTGG TTCTTGTTTTTATGTACTACTATAATGAGGTTAAATCATGAGAAACTTGTGATCAGTAAAAATTTCCATTTCAACAACATTAATCTTCCTAGTTATCTGT TTTTATGGCATGTTATGTTAACATGGTTTCACCATATACATGCCTTGCTTGGTAAGCTGTTACAATATTTCATTATAATATACTGATACATATACAATTA TACATGAAGCTAATATCTTATTGGGTTAATATACACACATATCTATGTGTATGGTTTATAATTGTGAATTTGTGACATTAATTTTCGGGTTTGCTTGGCA CAATGATAAGATTATTGTTTTGTTGCATGGAGGTCATACACTCAAATCTTTAAAACAATCTCTAAGTTATGAGGATGGTTTTGATCGGTTGGGTTTGTTT AAAGTGGATAGAGGTAAAGACCTTTTCCTCGATAAGAATATGTGTATCTTATGCTTTAGGACTTTATCGGAATTTCATATTTGGTTTTGAACTTCAATTT CCATGATTCTTCTCTTTTGTGGCAAAAACAAATTGGTTCAAGGTATCAAAGGAGACTATCAAAACCACTTCTGCCCAGCTCAATTTGTGCATATGCAATT CTGTCCCTGCCAGCATACACCAGCCCATGGACCAGGCTCCGGCACAGGCCATGCTGCGCCAAGCGCAGACACAGGCCACGCACAAGGCACAAAAGGCGGA CGAGGCGTACCAGGCGCACAAGGCGGACCAAGCGCACCAGGCGTACCAGGCGCACAAGGCGGACCAAGCGCACCAGGCGTACCAGGCGCACAAGGCGGAC CAAGCGCACCAGGCGTACCAGGCGCACAAGGCG
• Tissue: pods
• Gene name: LI_gene_170425;
• Additional information: details;

Expression of Ll_transcript_406581

FPKM

• PAB: 31.5
• PNAB: 42.9
• PS1: 23.4
• PS2: 8.7
• PS3: 16.1
• PW1: 26.4
• PW2: 30.3
• PW3: 17.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_406581

• Blastp: Protein MET1, chloroplastic from Arabidopsis with 67.53% of identity
• Blastx: Protein MET1, chloroplastic from Arabidopsis with 78.57% of identity
• Eggnog: NA(ENOG410ZEH3)
• Kegg: Link to kegg annotations (AT1G55480)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444205.1)
• Pfam: Tetratricopeptide repeat (PF13432.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;