Ll_transcript_405424

• Id Trinity: TRINITY_DN49568_c0_g4_i1
• Name Transcript: Ll_transcript_405424
• Sequence: ACTGCTTCAAGCAACTTAGTCTCCAGAAATTCTCAGCTCCATTATGCACCAGCTATCTTATATGAACCTAAAACAGGGCAGATTTCCGTTGGCTGACTTT TCACTTCTCAATCTTCCTGACCAATTTAAAAGTTCCTTTGACTTCCTTGATGGGCATATTAAACCAGTGATTGGAAGAAAAATCAATTGGATGAAAGCTG GAATTATAGAATCACACCTGGTGTTGACTGTAAGCCCATACTATGCTCAGGAACTAGTGTCGGGACCAGATAAAGGGGTGGAGTTGGACAACATCATTCG CAAAAATGGCATTACTGGAATTGTGAATGGCATGGATGTTCAAGAGTGGAATCCTTCCACTGATAAATACATAACTGTCAAATACACTGCTGCAACTGTA AGAATCA
• Tissue: pods
• Gene name: LI_gene_170429;
• Additional information: details;

Expression of Ll_transcript_405424

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_405424

• Blastp: Granule-bound starch synthase 1, chloroplastic/amyloplastic from Solanum with 69.75% of identity
• Blastx: Granule-bound starch synthase 1, chloroplastic/amyloplastic from Solanum with 69.17% of identity
• Eggnog: starch synthase activity(COG0297)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422043.1)
• Pfam: Starch synthase catalytic domain (PF08323.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;