Ll_transcript_406362

• Id Trinity: TRINITY_DN49573_c4_g1_i7
• Name Transcript: Ll_transcript_406362
• Sequence: CAAACTCACCCACTCCTCGAAAATCATCGCGAAAGAAGAGTATTGAGAAGAATGAGTGGTATAGCTCTAACACCCGCAGCATGCAATTCATGTTTCATTC CTTCTTCTTCTTATTCTCCATTCCAATCTCATTCTCACAAATTCAAAACCACCAAAGTTTCACTTCATTCACCATCTTTCACCTCCTCTGACCCCTTTGT TCTTCAACTCGCTGAAACCTTCGAAGACTCTCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAATTCTACCCTCCACAAGCTTCGAGAAGCT TCCTCCCTCTCACTTCTCTCTACTCCATGGCCTTCTCGCAGAGACGAATCTTTCCGCTTCACCGATGTCTCGTTCCTTCGAAATTCCCATATTGTCCCTC TCTCTCTTCCCCCAAACCCTTCTCTCCTCGCCTCTCTCTCACTCCGCAACAACGATTCCCCTTACCTCACCATCGTTGGAGGACACTTGATTCAATCCAT GTCCGAATTATCGGAGTTCCCGAAAGGTGTTTACGTTGGTACTTTGTCTGATCTGGATCCTGATTTAACGGCGAGGGTTTTGGAATTGGTTGGTGGATTC AACGGTGGTGATCTTTTTTGGTCAATCAACGGGATTGCTGCTCCTGATGTCACGGTGGTTTATGTGCCTGAGGGATGCCGCGTTGAGAATCCAATCCATT TCGGTTATTTTTCGGTTGAAGGTAGCAGTGAGGGTTCCGATGAGACCTACGTGTCGAACCCGAGGGTGGTGGTTGTGGTGGAGAAAGGGGGTGAGTTGGA GATAATTGAGGAGTTTTCTGGTACACAAGGGAGTGGTGAGTGTTATTGGACGAATTGCGCGTTGGAGGTTGCAATTGGAGAAGGTGCAAAGCTTAGGCAT TCTTATATACAAAATGAATCATCCGCGGCTGCGCATATCAAGTGGACCTCCGTTCGCCAGGAATCGTCTAGCACATATGAACTTACAGAAGTAAGCACAG GAGGAAAACTGGGCAGGCACAATCTTCATATCCAACAACTGGGCCCTGACACAGTGACAGAGTTATCAACTTTACACTTATCTGTTGCTGCTCAAACACA GGATCTGCATAGTCAACTTGTATTGGACCATCCACGAGGCTATTCCCGTCAACTTCACAAGTGCATTGTGGCCCACTCAATGGGACAGGCAGTTTTTGAC GGGAACGTAAAAGTTAATAGGTAATTCTGTTTTTTACCTATACAGCAATGGTGATTAAGCCAGTTATGTAAGATTGTAGTTTTATATGGCAATAGCTGCA AATCATATACTTGCTTCAATATGTTAAATAGCTATTTCGTTTTGAATGCAAATTATGGATTGAAATTCTCACACTATAATCTAATGAGCTGAAGCAATTG TAAACCATTTTCATCAATCATATACTATTTTTGTGTAGGTATGCTCAGCAGACAGATGCAGGACAGCTATCGAGAAGTCTTCTCCTCGAACCCCGTGCAA CTGTCAATCTTAAACCAAATCTCCAAATCGTGGCTGATGATGTCAAGTGCTCCCACGGAGCTGCAATAAGTGACCTGGAAGAAACCCAACTCCTCTATTT TCAAGCACGAGGCATTGACCCAAAGACAGCAAGAAGAGTTCTAACTTTTGCCTTTGGAGGGGAAGTGATAGACAAGTTGCCTTATTCTTCCCTTAGAGAG AGAGTAAGAAGTCAGATAAAAAATTTGTTGGATTCACCTCCAAATTTATGACCATTTTGAAGTTAAGTCAAAACATTTTTTTCCTTGCCATGGTTTTGAC TATTTTATTGCTTGTACTGGAATGAAGCGTGTACCACTGTATTGTATGTTACTGAAAGTTATAACATTTGGTGCATCTTGTATTGCAGTTAATTTCCAGT TGTAGTTTTTCAATGGGAAAAATGCATTTTAAATGGAATCTTCGACTATGCAGAGGCTTATAAATGGAGCGTGATTTTCATCATAAAATATGTTCGCTTT AGGTTTTGAATATTATTGATTTTGTCAGAGTAGTACATAAGGCAAAAATGCTTCAAAAATAAAACAATGTATGCAGAATAGTAGAAAGAGTAAAAAACAA AGAGGGTCTACAACTTCTTTGAAACATGTGTAGTAAAGAAGTACGGTTATTATCAATAGGATTGTAACAAGTGTAGTAAAGATTATGTAAAGAAGTGTGG GGAGCATCTGCTCTCAACTACTCTAAAGAGGCTCACCTGCTGCATATATATGGACTACTTGTACATCTAACGTTGATACTTTCTGTAATTGTGTCAAGTA CTTGTAACTTGTACATTAACATGGATTTAATATGTACTGTAACTATTTTAACTATTGAC
• Tissue: pods
• Gene name: LI_gene_170480;
• Additional information: details;

Expression of Ll_transcript_406362

FPKM

• PAB: 0.6
• PNAB: 0.3
• PS1: 0.4
• PS2: 0.2
• PS3: 0.7
• PW1: 0.4
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_406362

• Blastp: Protein ABCI7, chloroplastic from Arabidopsis with 55.17% of identity
• Blastx: Protein ABCI7, chloroplastic from Arabidopsis with 56.42% of identity
• Eggnog: Fe-S assembly protein(COG0719)
• Kegg: Link to kegg annotations (AT1G32500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444984.1)
• Pfam: Uncharacterized protein family (UPF0051) (PF01458.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;