| Id Trinity | TRINITY_DN49573_c6_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_406382 |
| Sequence | ATTTAGTTGAAGATATTTATAAAATGAAAATTGGTGAATTTATTTGGTTGGAAAAAGTGGCCCACGGGTGAAGGAGTTGCTGCGTCCCACGATACCAAAT TACCAAGCGACATATATTTCGAAGTTGAGAGAAAGTTGCAGACTTTTTGTAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAG AAGTTAAGAATAATCGGTCAAACAAAGCAAAGTAGTTGAGTTTGAATTTCGCAATGGAAGAACAACAACAACATATGCCATTGCTCTCTCACTTTCATCC CAGGCAGCCCTTCCTGGACGTTGATAATAGCTCTGTAGATAGCTGCAGTGATCTGCCAATGGCAGCTGGAAATTCTGGAACTTTCAGAGTGATGGAGCTG CCAAAGCATCCATCTAATAAGAAGTCTCGAAGAAATCAGAGCAGAGGAAAATCATCTAGCACGCCGTTTATGGATCAACAAGTATGGAAAGATTTTCCTG ACGATTTGTTTGAGGCTGTGATTGCACGGCTTCCCATTGCCACATTTTTTCATTTCCGAGCTGTATGCCAGCGATGGAATTCCTTGCTGACATCTAAAAA TTTTTCCCAGCATTGTGCTCAAGTCCCACAAGCAAACCCATGGTTTTACACAGTAACTCGTGAATATTTGAATTCTGGAGTCATGTATGACCCTTCTGTG AAAAAATGGCATCATCGCACTTTTTCAACCAGGCCTGTATTGTATGATATACCAGTGGCTTCTGCTGGCGGTCTCATTTGCTTTACTGGCTTTGATCATC GAGACTACTGTGTCTGTAACCCATTGACTCAATCATTCACAGAGTTACCAACTCGGCCAATTAAGTTCAATTCCCAATGTTGTCGCGTTGTAGGGATGAC AGTAAATGGTAACTCAACTGATGCAGGCTACAAGATCCTATTGGTAAATGCTAATGGAGATTATGAAATTTATGACTCGTTCAGAAAGTCTTGGAGCCAT CAAGGAAACATGCCTGCTGGTATCAAACGCCCAATGACAGTCAACTTTGGTTCATGTGTTTCGGTTGACAGCACAATTTACTTCACACGTTCATACCCAG AAGCGATTATATCCTATGATATGGCAACTGAGGTTTGGAAGCAGAACATAACCCCATTGCCATCACATGTGATTGACCACACGCTGGCTGAATACAATGG CCGGATTATGCTCGTGGGGTTGCTTGTGAAGAATGCAGCCACATGTGTATGCATATGGGAGCTGCAGCAGATGACACTCTTGTGGAAGGAGGTTGACAGA ATGCCAAATGAATGGTGCTTGGATTTTTATGGGAAGGCCGTTATGATGAAGTGCTTGGGGAACAAAGGTGGCCTGCTTATGTTGTCCTTGCGATCAACAT TCTCCGCGACATCAGTATTAGTGAATCGCTTGGTTAGTTACAACATGGCAAGTAGGGAATGGCTGCAGGTTCCTAGATGTAAGGTGTCAGGTGGAAGAAA AGGGCAATGGGTATCATATGGTACCGCATTTTATCCATCCCTAACTTCAATGGCTTGATTTAGCTTTTATGATACAACCATGGCCTTACACTTCTGGTCC AATTCTTTCAATTTGCTGGCTGTTGGTGCTGATGTAATAACAATGTTTGTTTCTGGTTTAACCAAGTAGATGAAAAATGATATGGGTTTCTAGTGATTTC TGTTTCTCCATGCTATGAAGCATGGATCAGGATTGCCTTGCTCTGAAGACTTTTTTTTCTCTGTAATAATGATGTCTGCAAACTGTTGCTTCCATCAAGG GCAGATAGTATTATTGTACTCTATAAGGGTGTATGCATATTTCAGTTTACTGAAATCATCCATCGCTCATAACTTAAGTGATAGAAACAAAGAATTTATT GTTTTACAAATAATTTATATTGGTCTTGATTTGAAAAGAGTCACTTCTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_170486; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_406382
| Blastp | F-box only protein 6 from Arabidopsis with 52.62% of identity |
|---|---|
| Blastx | F-box only protein 6 from Arabidopsis with 53.32% of identity |
| Eggnog | f-box only protein(ENOG4111JVR) |
| Kegg | Link to kegg annotations (AT1G27340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463903.1) |
| Pfam | F-box domain (PF00646.32) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |