Ll_transcript_406385

• Id Trinity: TRINITY_DN49573_c6_g4_i3
• Name Transcript: Ll_transcript_406385
• Sequence: GGCATGTATCCCATAAGAAAAGGTTAGAAATGAGTAAAGAGGAATACTAATAACTCCTCCCCGCGCGTGTGTTGTTGTCGTTAGAAAAGGGCACCATCTT ATTAATAACCAATTGGATCCAATATCCGAGTTCTCGGTATAACTTTTGTTAGGAGAGACAACCACAAACCAAAAAAGATAAAACGGAAGTAGAGAATGTG ATGAGTATGTACCCAAAAGAAGAGAGAGTAATGTGACGAGTGGGTGGGAGTGGGTAACTGAAAAACAAGAGAAGCAAAGATAAGAAGAGAGAGAGATGAA GAAATTGATTATTATGAGATGGGTTTGGAAGAGGAAAATTGAGTGAATAACAATAATAACAATAATCATCGATTTTGTGTGTTGGGGCATGGAAAGTGGT GGTGGTGGTGGTTTGTTGAATCAACTCATCTCTCTCCTTCAACAATCTTTAGATTCTTACAACAACAACAACAACAACAACAACAACTTTTCACAACAAC AACAACAATTTCCTTCTTCTTCTTCTTCTTCTTTCATTCTTAATCAACACACTCTCATCCTTCCACCTCTTCCTCACAGATGGACCTCCATTGATATTGA GGAGAGCTCTGTAAATGATTGCTGTAGCCTTGTAATGCCAGCTGGAAAGTCTGGTAGTTTCGGGATGGTGGAGCCTATAAAGCATCCAACTACCAAGAAG TATCGTAGAGATCGGAGTCGGGGCAAATCAACTGGAAGGTCCTGTGCAACTGAAGTTCTAGAACAAGAAATTTGGAAAGCTTTTCCCGAAGATTTATTTG AGGCTGTGATTGCACGACTTCCCGTTGCCACATTTTTCCGCTTCCGCTCTGTATGCCGGCAATGGAACTCTTTGCTGACTTCTCAAAGTTTTTCTCAGCT TTGTGCTGAAGTACCACAACAACATCCCTGGTTTTACACCATAACTCATGAAAATGTGAATTCAGGAGCCATGTACGACCCTTCTTTGAAAAAATGGCAT CATCCCACTATTTCAACACTGCCCTCAAAGTTGATCATTTTACCAGTGGCTTCTGCTGGGGGTCTGGTTTGCTTTCTCGACATTGGTCATCGAAACTTCT ATGTTTGCAACCCACTGACTCAATCCTTGAAGGAGTTGCCAGCTCGGTCAGTTAAGGTCTGGTCTCGTGTTGCTGTAGGGATGATCATAAATGGAAAGCC AAGTGGTTCAGGCTACAAGATCCTGTGGGTGGGTTGTGATGGTGAGTATGAAGTTTATGACTCACTGAGAAATTCTTGGAGTCGTCCGGGAAGCTTGCCT GCAGGTATAAAGCTTCCTTTATCACTCAACTTTAGGTCACAAGCTGTCTCTATTGACAGCACACTTTACTTCATGCGTTCAGATCCGGACGGGATCATTT CTTACGATATGGCAACTGGGGTTTGGAAACAGTACATAATCCCAGCGCCATTGTATCTGACTGACCACACCCTGGCTGAGTGTGACGGCCAGATCATGCT CGTGGGTTTGCTCACGAAGAATGCGGCCACATGCGTATGCATATGGGAGCTGCAAAGAATGACACTGTTGTGGAAGGAGGTTGACAGAATGCCAAACATA TGGTGCTTGGACTTTTACGGAAAGCACGTTCGAATGACTTGCCTTGGAAACAAAGGCTTGCTCATGTTGTCCTTGAGATCAAAACAAATGAACCGATTGG TTACTTACAACATAGCAAGTAAGGAATGGCTGAGGGTTCCTGGGTGCGTGGTGCCATGTGGGAGAAAACGGCAATGGATAGCGTGTGGTACTGCATTTCA TCCATGCCTGACTGCAACGGCTTGATGATTTAGCTTGTATCTTTGCAGCAATGGATTTTGGTACTGATGTATGTAACCCTAATGTTTATTGCTGGTTTAA AAAAATAGATTAAAAATATGGATTTGTAGTGATTCATGTTTCTTCATGCTCTCAAGCATGTAAACATTACTTTCGGTTTATGTTCTAAGTACTTCATCTT TGAACACTGGTAATAGGTGATATAAAAAGCTCCAGTTTCTTTCTCTATTCAATGAGTGAATGGTTTTCTTCTTGTTTTTGTGTGTGGTTTTTGGGGTAGA GGACTCGATCCTCCACACTTTTTAGCACGAGATTTTGAGCGTCCCGTCTCTATCGTATCACCACCTAGGCATCTTGAAAGTGAATTGTATTTCATGAATA TTATATCGCTAATATATATAAGGAATTGTTATTTTTTG
• Tissue: pods
• Gene name: LI_gene_170489;
• Additional information: details;

Expression of Ll_transcript_406385

FPKM

• PAB: 5.8
• PNAB: 8.3
• PS1: 6
• PS2: 6.6
• PS3: 6.8
• PW1: 6.7
• PW2: 5.3
• PW3: 8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_406385

• Blastp: F-box only protein 6 from Arabidopsis with 62.42% of identity
• Blastx: F-box only protein 6 from Arabidopsis with 66.67% of identity
• Eggnog: f-box only protein(ENOG4111JVR)
• Kegg: Link to kegg annotations (AT1G27340)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438292.1)
• Pfam: F-box domain (PF00646.32)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;