Ll_transcript_407550

• Id Trinity: TRINITY_DN49579_c2_g6_i4
• Name Transcript: Ll_transcript_407550
• Sequence: CAGATTGGAGTTGGTGACAATTTTGATCATTCTTCTCCCATGCAAGTGAACTTTCCCCATGAGGAGGTGATTGAAACTGCAGCACTCTTAAAACTTTTTC CTTACTTCTGCAAATTTCGACTATGTATATACACGACTCCTATTTTTTTAACTGTCATCTATGCACCCTTTTGCTTGGCTTGGCAGAAAATAGTTCAGAT CTCATGTGGGTGGAGACACAACATTGCTGTTACTGAATGTGAAAATGTATATTCTTGGGGAAGAGGCGCCAATGGACAACTTGGGCATGGGGAAACCATT GACCGGAATGTTCCAATGATTATTGAGGCTTTGAGTGTTGATGGATCTTGCGGGCAGCACATAGAATCCTCAAAAGCTCATCCAGTATCAGGGAAGTCCT CGGTCTCCCTATCAGAGATATATGCAGTTGTTCCAGATGAAGCTGCCAAGGGACAGGCTTCACATCCAGACAGGGGAGATAAGCTTGATGCAAGTGTCCC TGAAAGTGATGTCAATTGATAGAAGCTCGACAAAAAAGGAAGGCCTACTTCAAGAGAATGATCATAGTACCTATCATGGGGACCAGCAACCATATAAAGA GTAAGCGTGGGGAATGGGATAGTATTTTCAGAAGTAATAAAAGTGCAAGCAAGGCTTTGTGGGACAGTGGGAGTGTGAGCAAATTAGTTACAAGTAAGAA TGATGGACTAA
• Tissue: pods
• Gene name: LI_gene_170538;
• Additional information: details;

Expression of Ll_transcript_407550

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0.9
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_407550

• Blastp: Ultraviolet-B receptor UVR8 from Arabidopsis with 63.64% of identity
• Blastx: Ultraviolet-B receptor UVR8 from Arabidopsis with 47.67% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (AT5G63860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458700.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF13540.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;