| Id Trinity | TRINITY_DN49579_c2_g8_i1 |
|---|---|
| Name Transcript | Ll_transcript_407555 |
| Sequence | GCAATCCATGTCATTGCTCCACCCGTCACTCCAAAGCCCCACTCATCACTTTTCTAAACCCTCCACGTCATCACCCAAAACGGCACCGTTTGGAACCACT TTTTGTTGTTGTTGCTTCAGTAACATGATTAAATCACCACCTAACGGGTTCCAAAGCAAAAACATAACAAAAACGCTTCCAAAGAAACATAACACGCTTC AATTTCCTCATTCTTCGATCAAAATTTCTTCTTCACAATCCACAATCCTCGTTTTCATTCCTCTTCATCAATTCTCACATTGTATCTGGTGAATGAAGAT AGGATTTGGAACCTATTCAGCATAAACGTTATTCGAAACTCGGTTCAATATTCGTTATCAATATCTACAATTCATTATACACCAACAAAAAACGATTTTT TTAGCTTCAGTGGTTGCAATTTTCGGTTTTTTATTCGATTTCGATGACGTATGACGATGATGAAGACGGTGGTCGGAGAGAGGAGGTGGTTGCAGACCTA ACCCTCACAATCCAATCCGGTGATAACGGCGATTATGTTAAATTAATGGCAAGCCCTTCTTCGACGGAGGATACGGCGGAGGAACCTTCTTCTCCGGCGA GAGGAGGTGCAGTGTGGTATTGGGTTAAATTGGTAGTGTTGTTTTTATGCCTTGGGTTTTTGGCTGTTGTTATTCTGAAATGGGTTGGACCTTATTTGAT AGACAAGGAGGTTATTCCAGTGATAATTTGGGAAAGAAATACATTCAGTAATCCAGTGATAGCTGTTCTAGTGTTTGCTTCTGTTGCACTATTCCCAACT ATACTATTGCCATCTACACCTTCTATGTGGGTGGCTGGAATGACATTTGGTTATGGCTTTGGGTTTTTGCTAATAATATCTGCAGCAGCTATTGGTGTAT CACTACCTTTTGTCATTGGCTCACTCTTCCATCATAAACTTGAAGGATGGTTGGAAAAGTATCCAAAGAAAGCATCTATTATAAGATCTGCTGGTGGAGG AAATTGGTTTCATCAATTTCGAGCAGTTGCCTTAATCAGGATTTCTCCATTCCCATACATGGTCTTCAATTATTGTGCTGTAGCAACAAATGTTAAGTAT GGGCCTTACATTGTTGGATCCCTGATAGGGATGGTACCAGAAGTGTTTGTTGCATTATATACGGGGATTTTGATTCGAACGTTGGCCGATGCTTCACACG AAAAGCAATCTCTATCTGCACCACAAATTATTCTCAATGTTGTTGGCTTCTGCATCACTTTAGCTACAACCATCTTTATCACAGTATATGCTAAGAAAAG GCTCAGAGAGTTACAAAGAGAGGATGAAATATTGCTGCAATAGTTGAGAAGTTTTAGTCCTTGATTCCTTGTTTTCTGCATGAATCAGGTACTCTACTAT TTCATGTTTTGGCAATTTCTGCTCATTGCATTATTGGTGGGTGAGGTTGAATATATTAAGCAACTTCATCCATTTGAAGGGTTGACATCAAATGTATATT ATAACTGGTGGGAATGGTTGACCCAGGATATGCTAACATATCTCATATTTGACACATGTTTATGTTCTGTCATTTCCTTTCATTGTTAGTGGTTGTCTCA TTTATTATTGTATATGAATGAAGCTATGGATTTATAGGATTTGATTTGTAGTTTGCAAATATTACTTTTTGGAAATCAAATACATCAATATTATTACTTT TTGTATGATAAATATTAATAACGTTGCTTGTATGTGTAGAAGATTTACATAATTCTCTCATTGTTTTGAGAGAGGTAGCTTAATTATGTTGTTAATGTTT TGTGAAGAATAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_170540; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_407555
| Blastp | TVP38/TMEM64 family membrane protein slr0305 from Synechocystis with 31.12% of identity |
|---|---|
| Blastx | TVP38/TMEM64 family membrane protein slr0305 from Synechocystis with 31.12% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (slr0305) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446648.1) |
| Pfam | SNARE associated Golgi protein (PF09335.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |