Ll_transcript_405002

• Id Trinity: TRINITY_DN49581_c3_g1_i4
• Name Transcript: Ll_transcript_405002
• Sequence: CCATGTCCACTATCACTGATGCTCAGGTTTCTGTTCCAGCACAAAGGTAATATAATACAATAATTCCAACACCTTCAACCCATATTTATGTACTTTATCA TTCTTCATTTTCTAACTTTTCATGCTCGAACTTTAGCTATTACTTTCGTGTTCACAAAAAAATCTGTTTTTTGTTTGTTTTGGATTTAGTTTAATCAACT TGCCATTGTTTTTATGCTTTATTTCATCAGATTTTGTGTCAGATATCATATACTTGGTTTAAAATAGGCTGTGAAAATTTTTATACTCCTCTATGAATTA TTTAACCCTTTTTTCTTATTGGTTTAGCATAATCAAATCCATTTTTACTTGTTTTGACTGTTGTAGTTTTTCACTGTAACAGAAAGCTTTCCCTGTTTGT TAGTTATTAGGGAAAATTCAGTGATTTGTTAATTATTTGGAATTTTATCCAATCTTTGACAGTGTTTTTTATTTATTTTATTTATTACCCCTTTTTTTGG GGTAAGAAAGATTTTCTTTATGATATACTCATTTTTCCTTCATGTACAAAATTGATTGAAGTTTTTTTTGCAGTATAATCTTGGTTCTACCATTTTTCCT AAAGCGTATGGATTTTCCTTTTCAAATTCTTGGCTGCTTTTACTATTTGATTTCTTTTGACTCCTCTGATGCCAGATCCAATCTTTCTGAGGAAATTCCC AAGTCCAACTACCTAATTGATTGACATAGCTTTTGTTTTTCTTTTTTATTTAACAAAATATTCTCTTAACATTCTATCTGAACTTGGAAACGTGGTTCAA TACTCTTCCACAAATATAGGAGATTAAGTAATAAGTGAATGTGTTACCCTTCTTCCACAATCTTGAGATTGAGTATATTGTGGCAATTCATTAGATTGGA GTAGGGTTGTTAGCAAGAATGAATAACAAAATATCGCGAAGGCGTCCGTCTTTAACATCTTTGATCATCCTACATTGTACAATTCTTCCTGTCACTTTTA AGATTTGGTTGTTGTTGTTGTTGCTATAAAATGTTAAACACCTGTTAATGTCTGCATTTATCATGAATCATGGTATTACAAATTGTCACTCTTGAAACAA GGACCTTTCTACATATAATATGGTATATGGATGTTGGATGAGACTTAAAGCAAAGTGAGATAAACATTCAGGGATCTTACCACATATCCTAAGTTCATCC TATGAAATCTAAGATTGTTTTGTGAAGTAATATATCGGAGTGCCTACTCTAATGTTTATTAGAATTGTAAATCGGAGTGTGTACGATTAAAGGGTAATGC GCAATACCTTTTCATATGCTTTTCGATATCCTTTTACTTGTTGTATTTGCCATAGTTGAGATCGAATTTATGAAAATGTTGAATGCTCCCCTGTACACCA TATGTGACTTTATGTTCTGTATGTTTTCTCTTCTTCAGGTTATTAGGCAAAGTGGCTTTGGTTACTGGTGGAGCCTCGGGAATCGGAGAAAGCGTTACCC GCCTGTTCCATATCCATGGTGCCAAAGTTTGCATAGCTGATCTTCAAGACAACCTTGCAAAGCAGCTCTCTGAATCCCTTGGTGGCGAAGCAAATGTTAG CTTTTACCATTGTGATGTTACATTAGAGGATGATGTTCGCGGTGCAGTGGACTTTGCTGTGGAAAAATTTGGCACCCTTGACATCATAGTCAACAATGCA GGAATCTCTGGATCACCTTGTACAGATATTCGCGATACGATTTTATCCGAGTTTGACAAGGTATTCAATATAAACGTGAAGGGAGTATTCCATGGGATGA AACATGCTGCTAGGATTATGATTCCAAAGAAGAAGGGCTCCATCATTTCTTTAGCTAGTGTTGCAAGTACTACAGGAGGCATAGGAATACATGCATACAC AGGTTCGAAGCACGCTGTGGTCGGACTCACGAAGAGTGTTGCAGCTGAATTGGGGAAGCATGGAATAAGAGCGAACTGCGTCTCACCTTATGCAGTCCTA ACAGGTTTGGCTCTTGCTCATTTGCCTGAGAACGAGAGAAACGATGATGCCATTGCTGGTTTTCGCAATTTTGTTGGGTCGAACGCCAACTTGCAAGGCG TGGAATTGACTACTGATGATGTGGCTAATGCTGTGCTCTTCCTAGCAAGTGATGAATCAAGGTATATCAGTGGAGATAATCTGATGGTTGATCGAGGCTT CACCAATGTGAATCACTCACTCGGAGTTTTTAG
• Tissue: pods
• Gene name: LI_gene_170563;
• Additional information: details;

Expression of Ll_transcript_405002

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0
• PS2: 0
• PS3: 0.1
• PW1: 0.3
• PW2: 0.6
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_405002

• Blastp: Xanthoxin dehydrogenase from Arabidopsis with 69.4% of identity
• Blastx: Xanthoxin dehydrogenase from Arabidopsis with 69.4% of identity
• Eggnog: Dehydrogenase reductase(COG1028)
• Kegg: Link to kegg annotations (AT1G52340)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427658.1)
• Pfam: short chain dehydrogenase (PF00106.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;