Ll_transcript_405012

Id TrinityTRINITY_DN49581_c4_g2_i3
Name TranscriptLl_transcript_405012
SequenceGAATTAGGAAATGAAGCCAGAAAATCTATTACAGAATATTCATCTTCGAACCCAAAAGTGCAGCGTAGGCTGTCCCACACTTAATCATTTCCTCAACGGC GGCGTTCCCTGCAACTCAATCACCGAACTCGTCGCCGAAAGCGGAAGCGGCAAAACTCAGTTCTGCCTCCAACTCGCCCTCTCCGCCCAACTGCCACCAT CTCACGGCGGCCTCTCCGCGTCGTCACTATATATCCACTCCGAGTTCCCCTTTCCGATACGCCGCCTTCGACAACTCTCGCTCGCTCTCCGTTCAACTTA TCCTCATCTCTTTAGAAGCGTTGATCCGTGTGATAGTGTATTTGTTCGTGGTGTTTATTCTGCTGATGAATTTGTTCAGTTAATTCCGATTATTGAGTTG CATATTTTGAATTCCAAGTTTCGTTTGCCGGTTAGAGTTATTGTTGTTGATTCTATTGCTGCTTTGTTTCGCTCTGATTTTGAGAATACCGGTTCTGACC TTAGGCGTAGGTGAGTGATTACACTGTTGTGTTTATTTTTAGATTAAATCGTCAATTTTAGTCCCTAACTTTTAGATTAAGTCATTTAATGTTCAAATTG TTGGTGAAATTAGTCTCTTTTTTGTAGTACTTTTTTTTCGTATAACAAGGGTATCCCACAGCTTAAGGAAATAATCCCTTCGTGTTGGGTGACTCCTCGT AACAATTGTCGCTCACAGGTCAGAGCTTTGACCTTATACCACTAGAGTAACGCCTTGTTGATCTTTTTTGTAGTACTAAGTTCAAAATGTTGGTCAAATT AGTCTTTTTGTGGTACTAAGTTCAAAATGTTGGTGAAACTAGTCTTCTTTTAGTACTAACTTGATTATTGTTTTCAAAGTAAATAGTTTACATGTCTTAA ATTTATTGAAATTACACATTGTATCCATTTTTTTATGCCTACAGAAATCATCAATGTCCATATAATAATATACTTGCATTTCACTTGGTACAATGGTGAG TGTAATTGCAACGACCACCCTAAGGGTGGTGAGTGTAACATTTTAAACATGCAGCTGGTAAGTGTAATTTTAAACATGAGGATCGTGCACTTGAGTGAGT ACTTGTAATCTTCTGGTAGACGAGTTTGCCCTACTCTGGGTCTGGCCTGGGCCAACTGTGTTAACTCAGGTGTAATTAAGTTAAACCTGAGGGGGTGTCA ATATAATTTACGCCTTGTTTCTATCATTTAGAGCTAACTTGATCTATGTTTTGAATCTAACTTTAGAGATTTAGGGATTATGAACAAATGTGTTATTTGG TCGTTTATTTATAAGATGAGAAATGATAGTAACACACTATTTAGCAAACATTCTGTTGTTGATTCATGTTACATCTCCAAAATCATCCCCACTATACTAT GTATTTGGTCTATCCGTCCAAATCCACCAGATAATAAAGTAAGAATGTGTGTGGACTATGTTGCTAGCATTTCTCTTATAATGCTAGCAGCACACTCTTT TAAACACTCTTCTTAAAAGCTCATTTTGGTAGTAGTCCTGCATGAACTCCATTTGATGGTAAAATAATAAACCATGCCTTGAGGAGAATGTAAAAATGTA GTACTACCAATTTTTCATTCACATTTGACCTTCTAGTGATTTTTTGGATCCATCTCTATGTAGGTCATCGCTGTTTTTCAAGATTTCGGGGGCATTGAAG TCATTGGCAAAGAGGTATGGATTGGCGGTCATGGTAACAAACCAGGTGGTTGATATGATTGGCGGGGCATGTCCGGGTATAACAGGGATGAGGATTGGGA ACTTGACTGAGTTGTATTCTTCGGGTAGACAAATTTGCCCTGCTCTAGGTCTGGCTTGGGCCAACTGTGTTAACTCGAGGCTGTTCTTATCAAGGGATCA AGCCGTTAACGGGAATGGTGAACTTTATCAGCGAAGGAGACTCTGTGTCGTGTTTGCTCCTCATTTGCCTGCATCTTCTTGTGATATTGTGATAAAAGGA GAAGGAGTTTTTGGTGTAGAGATGCAGCAGGCATAACCATTAAGTATAATATGGGAATTTCTACCAGGTACAAAGAAATGAGAAATGTGTGAATTCTTAT GGGTTTTTTCTGATTTATTTTAATAGGTAGAAGTAGTGTCTTAAATTGTGGTTGCGGTTACTGTGATTGCGGTAACGGTTGCGATTACTGCGATTGTGGT CGTTGCGATGCGGATTGTGGCCGTTATGGTGTGAATTACTTTGTGAGTAAAAATATATTTTTGACATCGATGTGGTCTGATGCGGCCCAATGCGGTTGCG TTGCGACCTGATACAGTCCAAATGCGGTCCGATGTGGTTGCGTTGCGGTCTGTTGTAGTCACAAGTGCGGTGTGATGCGGATGCGGCGGTCACCATAACC GCAATAATGCGGCCGCATCACGTGATGCGGTCCACATTTTAAAACACGGAATGTGGTCTTGGTTGCAATGACTTGATTGAGGCCATTGCAATACGGATTA TAGCCGTTGCGGTGTGAATTATTTTATGATTAAAATAATACTATAGAATTCGATATGGCGTGTGTGGCCCAATTGTGTTCTGATTCGGTTGCACTACAGT CACATCATTGTGATTTGTTGTCACACCGCAATTGCGATGTGATGCGATTTCAGTAGTCACAATTTGAATTTGTTGATTAATATGACTCATAATCTTTTAC TTTTATATTCATTAGTCAATAAAAAGCCAATATGGCTGTTAGGAATATTTTACCTAGGATGCTAAAATACTTATCTGACTTATTATATGTATCTTTTGAA TTTGTTGATTAATATGACTCATAATTTTTTATGCATCGGTTTTCTTTTACATGCTATATAAATATGTATCTTGT BLAST
Tissuepods
Gene nameLI_gene_170566; 
Additional informationdetails; 

Expression of Ll_transcript_405012

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_405012
BlastpDNA repair protein XRCC3 homolog from Arabidopsis with 45.87% of identity
BlastxDNA repair protein XRCC3 homolog from Arabidopsis with 52.91% of identity
EggnogCan catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (By similarity)(COG0468)
KeggLink to kegg annotations (AT5G57450)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019415847.1)
PfamRad51 (PF08423.10)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;