Id Trinity | TRINITY_DN49589_c0_g1_i5 |
---|---|
Name Transcript | Ll_transcript_407306 |
Sequence | GTTACTTTTGTATTCTGTGTTATTTTGAAAGACAAATTTTCTCTCTCTCTCTCTCTCTGAAGCTGTTGGACAAAAAAAGATAAAGTTTTGAGAAGATGGG CGAGACAGACCACAACCACCAGGCACCACCGCCAGTTCAGGCACCTCCGGTGGGACCACCACCGCCAAATTTTGGACTTTCAAGGGGACCCACTTGGGCT CCAGCTGAACAACTTCTGCACCTTCACTATTGCATCCATTCCAATCCTTCATGGCCACAAGCTATTCTGCTGGCTTTTCAGCATTATATTGTGATGCTGG GAACAACGGTTATGATCGCAAACACCCTTGTGCCTTCAATGGGTGGGAGCCATGGTGACAAAGCACGTGTGATCCAGACATTGTTGTTTATGTCTGGACT GAACACACTGCTGCAAACTTGGTTTGGGTCGAGGCTGCCAACAGTGATGGGTGCATCATTTGCTTTCATCCTTCCCGTGTTTTCCACCATAAATGATTAT ACCGACGAGACATTCTCATCTGAGCACGAGAGGTTTATCTACACAATAAGAACAGTTCAAGGGTCCCTGATTGTTTCATCTTTCATCAACATCTTCCTTG GGTATAGTAAAGTATGGGGAAATCTAACAAGGTTGTTTAGTCCAATAATCATTGTACCTGTGGTATGCTTGTCGGGCCTTGGTCTGTTCGCTAGGGGCTT TCCGATGGTTGCAAATTGCATACAGATTGGACTACCTATGCTCATTCTACTGGTCATAACACAACAGTACTTGAAGCGGCTTGTTCCTATTGCACATCAC GTACTTGAGAAGTTTGCTTTACTTATCTGCATTGCTGTTGTCTGGGCTTTTGCTGCTATCCTTACAGTAGCTGGTGCATACAATACAGCTAAAGTGCCGA CCCAAATGAGTTGTCGCACCGATCGCTCATATCTCATGTCTACTGCTCCTTGGATTAAAGTTCCATACCCCTTTCAGTGGGGCACCCCTATATTCAAAGC TAGTCATGTCTTCGGGATGATGGGGGCTGCACTTGTCTCTTCTGCAGAGTCAACTGGTACTTTCTTTGCGGCAGCCAGGCTTTCCGGTGCGACACCACCT CCTGCACATGTGCTCAGCCGAAGCATTGGGCTGCAGGTCATGTTTTAATGATCTTGCTTTTTATCTATTAATTTAATTGTTCTCTTACATTTACAAAATC CTAACATGCTTGTACTTTGTACCATTTTGCCATTTGTAATACAAACTCGTCTTTTACCCTTCTAAATGCAGGGTATTAGCATGCTGGTTGAAGGAATTTT TGGTTCTCTTGTTGGTACTACTGCATCTGTGTAAGAAAGAAATTCTCTGAATCTTTTTATGACCCAAATTGGACATGATGTTCTACAATTTTTGGTTTCT TTCCGGTCAAGTGTCAACTTTTTGTTCAATAGTTTTCCTTATTGGTGTCTTGTGTAATAGCTATGGTGCCTAATACATTGATGGAAAGTTACTTATGGTT GACATTCTATCTTTTTTACTTAGTTTTATGATATTTGAGTTACTAAGAATTCAACGTATTAGGTGAAGCATTTTTTAAAGCTTTATCAGTGGTTTCCTTA ACAGCTTAGCTTTCTAATCCCACTAAGCTTCAATGAGCATATCTCTGCTTAGCCTGTGTTTATTTCATTACTCTGTAGGAACTTTAGACATGGAAATCTA CAAAATCTTGTTTTAAATAGGATTTATGCTTGTAATTATTGTGTTTGTTAGAAGTGAAAATGGGAAGAGTGGAGTGGGATGGAATAAAATTTTGCGAAAG ATCCAGGGTCCAGCCATAATCCGTGTTTATAAATTGTCATTTTTTTTTTCTTATTCCTCCACTTCTTCCATGCAAACCCTAAACCTTGAATGACTAATTC TCATTATAGGCATATATTTCTTGAGTATTTGCAATTTGCATCTTAAGGTAATAAAAATTTGTGGAAATCATCTTTTTAAGATCTCCGAATCCTCATATCA AATAAGTTATATTTATATTTGAGCATCTTTCAGAACTTGTGGTAAATTGTAATCTTGGTTTTGCAGATAAAGAAATTTGTCCAATGACATGTGTGAGAGG AATATTAGTTTACATTTGAATTTAATAATTTTCTGTTCTTATAATAATCTGGCCAATCTAATTGATAATTGCAGTGAAAATGTTGGCTTACTTGGTCTAA CACATATCGGGAGCAGAAGAGTAGTGCAGATTTCGTGTGCTTTCATGATCTTCTTCTCTATTTTTGGTATAATATTCTACCCGGAACTTCTCTAATCCTT TTATAATTACTTATCCTCACCCTAACAAACCCTTATATTTGTGATTAACGATTACTTATTTCCCATGTCTCTCCTTCAGGGAAATTTGGAGCTTTTTTTG CATCAATTCCCATTCCAATATTTGCTGCTATATACTGTGTTTTATTTGGCATTGTTGCTGCTGTTGGAATTTCAATGATACAGTTTGCAAATAACAATTC CATGAGAAATATGTATGTTTTGGGCTTAGCATTGTTTCTTGGGATCTCAATACCTCAATATTTTGTCATGAACTCTGCTCCAGATGGTCATGGCCCTGTT AGAACTAATGCTGGATGGTTTAATGACATCTTGAACACCATCTTCTCATCTCCTACAACGGTGGCTATAATTGTCGGGACGGTTCTAGACAACACTCTCG AAGCTAGAGACAATGCTACTGATAGAGGACTTCCATGGTGGGTTCCATTCCAGGTTAGGAAGGGAGATGTTAGAAATGGAGACTTTTACCGTTTCCCTCT TAGGTTAACTGAATATATACCCACCAGATTTCTGTAAAAGCATTTGTTATGCTTGTATTTAATTCCTGCTGACCTGTAAATTATGGATAATTAAGCTAAA TTTCATCATAGGCAAGCAGCCAACATTTACCTTTATAAATTAATTGTATAAATGGGTAGATACTTTGACTTAGTAATTTTTGTTATCCTGTGTTATTTGC ATGCAAAAGTTAAATCGAATGGTAGACATGATTACGGAGCAAAGAGATGTATTATACTCTTTAGTTTAGGTCATAGATTTGACGAAATAAG BLAST |
Tissue | pods |
Gene name | LI_gene_170615; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_407306
Blastp | Nucleobase-ascorbate transporter 3 from Arabidopsis with 69.94% of identity |
---|---|
Blastx | Nucleobase-ascorbate transporter 3 from Arabidopsis with 61.87% of identity |
Eggnog | permease(COG2233) |
Kegg | Link to kegg annotations (AT2G26510) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458878.1) |
Pfam | Permease family (PF00860.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |