Ll_transcript_407203

• Id Trinity: TRINITY_DN49597_c2_g1_i29
• Name Transcript: Ll_transcript_407203
• Sequence: AAGAGTGGGTGCAGATGCTTGGTCCCTCATGTATCCTTCAATTCCTGATAAACTACAAAGCTTATACAATGATGGCTTCAAAGTGGTAATTTTTACCAAT GAATCCAATATTGAACGTTGGAAGAATAAGAGACAGGCAGCTGTGGATTCAAAAATTGGGCGTCTGAATAATTTTATTGAGCGAGTGAAGGTTCCTATTC AGGTTTTTATCGCTTGTGGGGTAGGTAATTCAGGTAAAGGCAAAGCTGCCATAAAGGAAGATGATCCTTTCCGCAAACCCAAACCAGGGATGTGGCAACT TATGGAGAAACACTTCAACTCCAGCATTTCCATTGATATGGATCAATCCTTTTATGTCGGTGACGCAGCCGGGAGAGAAAAAGATCACAGTAATGCTGAT ATTAAATTTGCAGAGGCAATTGGTTTAAAATTTTATGTCCCTGAAAAGTACTTCGACGCATGAGCATCTGATTTGGCCATTGCTTCATAATATTTGAGTT TGGTTAGAGACAAGGATGAATTAAACTTTTGAAGCACTCATTTGTTAGATCGCAACAATGACGAAGCGATCCTACAAAACCGAGTTAGGTTGCATAGCCT GCGATGAACTCACTGAACTCGGTGCCGGTAAACCGGGTTGGCTAGTGGACAATCCCAACCTTCTCTCCGCCATCGACACTCACTCCGTCGCCCTCGCCAA CCGCTACACCATCCTCCTCCTCTCCTGGTCCGACCCGGATTCTACTCCGATCAAGATCCGACCCGATTTGTCACCCATCCAGGCCGAGCATATCTCCGCT ATCGAGTGCCTCATTTTCGACGATCTCCGTGTCATCGTCGCAGGAACATCTTGTGGCTTTTTGCTCTTTTACTCCTTGCGTGGTGAATTGATTCACAAGC AGATGATTTATCCTGGAAGAGTTTTGAAGTTAAGAGTTCGTGGAGTAAAGAAAGATTTGATTCAAGATACTTCCTCAGAAGAGTTTTGTGTCATAATGCC TGGTGTAATTGCCCGATTTGATGGCTCTGATATCCAGAATATGCTGCAGAAATGGTTTGAAGAAGTGCAATCTCAATTTTGGGGTCAAAAGCCAAAGAGC CAAGATTTAGAGGATTTTGGGAATTCTTATGGAATGTTACCTCACCAATTGTGGAATATTGGCAAGTATGGTACTTGTGCTGATGCAACACTCACTGGCA TAATGCCTCCTCCACTGATGGAACACCAGTCAAGTCAACGTTATTATTGTGCAGTGGCTGTTGGAGAAGATGCTGTGATTTCTGCATACAGGCTTTCTGA GGACAAAGGCAGGTCTTTAGTGGGAGCTATCTTGTCTAAAGTTGTACCTGCAACAATTTCGACAATAACTTCTTTTTCTAAATTGATTTGGCGGAGTGAT CAGACTTCTCCAAAGAAATCAGAGCAGAAGCCTCAGTCATTTGCTCGAGCTTCACCTCTGACATGTTTAAAGGATCACCCTAGGAAGGGTGAAAAGCTTA CCTTGTCACCAAGTGGTACATTGGCTGCTATAACAGATTCACTTGGTCGCATATTGCTGCTTGATACACAAGCTATGGTGGTGGTGCGCTTATGGAAGGT TTTCTCTTGAACTTTTGGTCCCAACCACCCTCTCCCCCAAGTTATTCCTGAATAAAATAACCATTCCTTTTTTTGTTGGATAAACCACTGTTCTATGCCC TTAGTATGTAATTTATTATCTTTGCAGGGATATAGGGATGCAAGTTGTCTATTCATGGAGATACTGGTGAATAAAGATATTGCATCAACAAGCTCTACTA ATCGTGAACCAATGAAGAGTGATTACTGCTTGTGTTTGGCGATTCACGCACCTAGAAAAGGAATTATTGAGATCTGGCAAATGAGAACTGGAGCACGGCT TAGAACGATTCGATGTAGAAAAGGTAGCAAAATGTTGCAACCCTCTTATAGGTTTGGCGCATCAATGTCCTCTCCATATGTCCCTCTGGAAGTATTCTTG TTTAATGGAGACTCAGGTGTGATATCAGTTTTAAATCGGAACTTGGATTCCTGATGTGTTTTGATTCTTTTCCTTTCTGATAAACCAAATAATATATTCT TATACTTGAATATAAAGGTGGTTATTGTTTTACTTTGTTGTGTTAGTGCCGAATATTAATGAAAATGATATATTGCCAAAGTCAAAA
• Tissue: pods
• Gene name: LI_gene_170689;
• Additional information: details;

Expression of Ll_transcript_407203

FPKM

• PAB: 0.7
• PNAB: 0.6
• PS1: 0.3
• PS2: 0.5
• PS3: 0.2
• PW1: 1
• PW2: 0.4
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_407203

• Blastp: Rab3 GTPase-activating protein non-catalytic subunit from Homo with 25.96% of identity
• Blastx: Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 75.33% of identity
• Eggnog: RAB3 GTPase activating protein subunit 2 (Non-catalytic)(ENOG410XTJ2)
• Kegg: Link to kegg annotations (25782)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449206.1)
• Pfam: Rab3 GTPase-activating protein regulatory subunit N-terminus (PF14655.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;