| Id Trinity | TRINITY_DN49597_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_407171 |
| Sequence | AAGAGTGGGTGCAGATGCTTGGTCCCTCATGTATCCTTCAATTCCTGATAAACTACAAAGCTTATACAATGATGGCTTCAAAGTGGTAATTTTTACCAAT GAATCCAATATTGAACGTTGGAAGAATAAGAGACAGGCAGCTGTGGATTCAAAAATTGGGCGTCTGAATAATTTTATTGAGCGAGTGAAGGTTCCTATTC AGGTTTTTATCGCTTGTGGGGTAGGTAATTCAGGTAAAGGCAAAGCTGCCATAAAGGAAGATGATCCTTTCCGCAAACCCAAACCAGGGATGTGGCAACT TATGGAGAAACACTTCAACTCCAGCATTTCCATTGATATGGATCAATCCTTTTATGTCGGTGACGCAGCCGGGAGAGAAAAAGATCACAGTAATGCTGAT ATTAAATTTGCAGAGGCAATTGGTTTAAAATTTTATGTCCCTGAAAAGTACTTCGACGCATGAGCATCTGATTTGGCCATTGCTTCATAATATTTGAGGT ATGGTACAGTATTTCGAAGTGACATTACTGACAGAGAGGGTATGAAATTAATTTTTAAGTTTACTTTGCTTTTCTTTATTAGTTGTATGAATCTAGAATA CTAAACGGGTTAATCATTTTAATGTAGACTACTAATTTGTTTCAAATGCAAACTTACTAATCTGTTGCTTGAATTCTAAAATGGCATGTGTTGAGTGATT TGAAAAGAAGCAGTTCTCCATATTACTTATTAATATATCTGTATATTCGATAACTGTATATGAGGAATTATAAATTTAATCACTTGCAATCATTACTCTT CAGTTTTTTTTTTTGTTGGGGTCTATCCTGAAGTACTCAAATTGGATCATCTAGTGTTTGATCTAGGTTTATTTTAAATCAAATTATTTTTATTTTCTCA AATCAATTGTGGCGTGCTATTATTTATTTAAAAAAGACCTCCAAACGGAGAGGTTTTTGAATAGGCAAAATATTAAGATTGATTCTCTATTTTTTTCACA TGTTTTTTAAGTTATTCATGATTTAAAATGGGTCTCATACTCATAGGTTGTTTTTTCCATTACTAAGGCTTATTCCTTTTTGAATGGTATGGTTTTAGAA TAAGGTATTTTGATCTCAATGATATTGAAAATGTGATTTTAATTGAGAATCAAGAAATTGGGCAAATTTACATCTTTGGTGTGTTTTGACTTTTTTATTA TTGTTGTAGTATAACTTATTGAAAAATTATGAAAGTGGTGTTAATTTGGATGGTGTCGTGTATGGAAAACACAAAACATTATTTTATTTAGGGGTTTCGT GTTTCCCATACACGAAACATTAAAAAAAATTCTCTCCCCACAAAATGTCACCTACGGCTACGAGAAATGTATAACGTGGCCTGGAGCCAGGAGAATTGAG CAGGAAATATAAAAAAACTCGGCTAGGATTTTATTGTTCAATGTCGAATGGTTTATTGGATATGTTTTTTGTTTATGATTTTACCTTTGTTGTATAAACT TGTATGTAATTTTTTAATACATGTAGGGTTTGCATATATGTAGGATTTATTTATATTTATTTTTATATAATTATTGTTAATGACTATTTTAATATTGTTT TAGGGTTTAGTGGATATATTTTGTATGTATAAAAAACTACATATAAATTTATACAACAAAGTAAAATTTTAAACAAAAAATGTATCCAATAAACCATACA ACATTGAATCATAAAATCATAGTCGGAGTTTATTTATATTTCTTTAGCTCCAAGTCACATTTTTCATATCTCGTCGCTGCAGGCCACGTTTTGTGTGGAG TTAAATTATTTTTTAATGTCTCATGTATGGGAAATACGATACCCCTAAATAAAATAGTGTCTCGTGTTTCCCATATACGACACCATCCAAATTTACACCA CTAAAACCATAATAAAAAAATTAAAATACACTAAAGATGTAAATATGTCTGCTCTAAAGTCTCCTACACTTTTGTTAAAAGGTAATCCCACAGAAAGTTA CGATCCGTGATTGATATTATTTTATTGCCTTTTGTAGACAAAGTTTTTTATTGGAAATAAATAGAGAAAGATTGTACTCGGTGACAAAAAGATTGTCCTC GGTGACAGAAACATTGAACCAAAAGATAATTTATCTTAATTTATTCACTACTTAACATATCTTTGGTTCCAATTCTTTCTATGAATTTTTATTTTAAAAT ATATTATAAAAAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_170689; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_407171
| Blastp | Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 75.33% of identity |
|---|---|
| Blastx | Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 75.33% of identity |
| Eggnog | histidinol-phosphatase activity(COG0241) |
| Kegg | Link to kegg annotations (AT3G14890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449579.1) |
| Pfam | Polynucleotide kinase 3 phosphatase (PF08645.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |