Ll_transcript_416121

• Id Trinity: TRINITY_DN49609_c1_g1_i1
• Name Transcript: Ll_transcript_416121
• Sequence: GTCGAGAAGGTTCTGGAAGCAAAGCAAACCCCTTCTAAAACCCTACTTCGTTATAACTTCATCATTTCATCATTTCATCAATTCATCAATCATGCACAGA CTCTCTAGGCGTTGCTCCTCCCTCTCCGCCCTCCTCCGCCACGCCACTCCACTCCGCCGACCACTCTCTTCTTCTCACATCGCTTCGGTTGCTGATAATG ACACCAATTCTAGGTGCTATTCCGTGTTAGCCTCAGAGAAATCCACAAATAAGGTAGAGTTGAGAAGGGATCTGTTTTTAGGAAAGCGATATGAATCAAC TGCTGCAGAATCTTCTTCCTCCAATTCCCCACCAGCCGAGAGATACGAGTACCAAGCCGAGGTTAGTCGCCTCATGGACCTCATTGTTAACAGTTTATAC AGTAACAAGGAAGTGTTTCTTAGGGAGCTTATCAGCAATGCAAGTGATGCCTTGGATAAGCTGCGGTTTTTAAGTGTCACAGAGCCTGAACTAATGAAGG AAACACTTGATTTTGATATCCGGATTCAGACAGATAAAGATAATGGGATTATCACAATTACTGATTCAGGCATCGGTATGACCAGGCAAGAGCTTGTTGA TTGTCTTGGTACTATTGCTCAGAGTGGAACTGCGAAGTTTTTGAAGGCTCTAAAGGATAGCAAGGATGCTGGGGGTGACAACAACTTAATTGGTCAATTC GGTGTGGGATTTTATTCTGCTTTTCTGGTTGCTGATCGGGTGGTTGTCTCAACCAAGAGTCCAAAATCTGATAAACAATATGTTTGGGATGGAGAGGCAA ATGATAGCTCATATACTATTTCTGAGGAGACAGATCCTGAGAAGTTGATTCCAAGAGGAACCCGCCTTACTCTGCATCTGAAGAGGGATGCCAAAGATTT TGCTCATCCAGAGCGGATTCAAAAGCTTGTGAAAAACTATTCACAATTTGTCTCATTCCCAATATACACTTGGCAGGAAAAGGGATACACAAAAGAAGTG GAGGTTGATGAGGATCCAGCTGAAGCCAAGACGGATAACCAAGATGACAAGACTGAGAAGAAGAGGAAAACTAAGACTGTTGTTGAGCGTTATTGGGATT GGGAGCTAACAAATGAGACCCAACCAATCTGGCTTCGTAATCCGAAAGAAGTCACTAAGGAGGACTACAATGAGTTTTACAAGAATACCTTTAATGAATA CCTGGAGCCTTTAGCGTCGTCACACTTTACCACAGAGGGTGAGGTAGAATTTAGGTCTGTACTTTATGTGCCTGCTATTGCTCCTTCAGGGAAGGATGAC ATAATCAATCCCAAGACCAAGAATATAAGACTTCATGTGAAGAGAGTGTTCATTTCAGATGACTTCGATGGAGAACTGTTCCCTCGATACTTAAGCTTTG TCAAGGGTGTGGTTGACTCTAATGATCTTCCACTCAATGTGTCACGTGAAATTCTTCAAGAGAGCCGCATAGTGCGGATTATGAGGAAACGGTTAGTTCG AAAGGCTTTTGACATGATTCTGGGGATATCCATGAGCGATAACAGAGGGGACTATGAGGCGTTCTATGATAACTTTGGCAAACACTTGAAACTGGGTTGT ATTGAAGACCGTGAAAATCACAAACGCATTGCTCCTTTGCTCCGATTTTTATCATCCCAAAGCGAGGAAGAACTGATCAGCTTAGACGAATATGTTGAGA ATATGAAACCTGATCAAAAGGATATTTATTACATTGCCTCTGACAGCGTGACTAGTGCAAAGAACACACCTTTCTTGGAGAGACTTGCGGAGAAGGATCT TGAAGTGCTGTTTTTGGTGGACCCAATAGATGAGGTTGCCATTCAAAGCCTTAAGTCATACAAGGAAAAGAATTTTGTTGACATTAGCAAGGAAGACCTG GATATAGGTGAAAAGAACGAGGAAAAGGATAAGGAGATAAAGCAGGAATTTAGCCAAACTTGTGATTGGATTAAGAAACGTTTGGGAGGTAAAGTTGCAA ATGTGCAAATTTCAAACCGACTTAGCTCCTCACCTTGTGTTCTGGTGTCAGGAAAATTTGGTTGGTCTGCAAACATGGAAAGGTTAATGAAGGCACAAAC TATGGGTGACCCCAACAGCTTGGAATTCATGAGAAGCAGAAGGGTGTTTGAGGTCAACCCTAACCACCCTATTATCCGCAACTTGGATGCTGCATGCAAA ACAAACCCCGATGACGAGGATGCCCTCAGAGCTATTGATCTTTTGTATGATGCAGCTTTGGTTTCCAGTGGTTTCACGCCTGATAATCCAGCACAGCTTG GAGGAAAGATATATGAGATGATGGGTTTGGCTCTTGGTGGTAAATGGTCAATTCCTAATCAGTCCCAGCCACAGCCACAGCCACAGCCACATCATGTCCC AGAAACTGTAGAAGCTGAGGTGGTTGAATCTACTGAAGCTGGTTCTAACAAGTGAGAAGGGATTATTATTGAAAGATTTTTTTGTTTCCCCGATAGAGTT TTCTACGTTTCAATGCCTGGTTATTGGCCAAACTTGTTTTTGATGAACATTTCCAATGGGTGATAATGGATCATTTTCATGTAGTATGGTATAAAGTAAT TAAGATATCCACTATTTGACATTTGAGTAGTTTTTAATTTATTTCGAAAAGGTTTCTTCATATTATTTGGACTCATTGTATTTTGGAGAGGTTTCTTCAT ATGATTTTGGATTCATTGTACTCCCTTCCCTCAATTCTATGTCTTAATTGTGATATTCCATTCAGACCCATATAAAATATATTTGATAATTTTGAAGGTG ATAAAGTAGATAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_170769;
• Additional information: details;

Expression of Ll_transcript_416121

FPKM

• PAB: 2.1
• PNAB: 34.9
• PS1: 11.8
• PS2: 13.6
• PS3: 13.3
• PW1: 11.2
• PW2: 8.7
• PW3: 7.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416121

• Blastp: Heat shock protein 90-6, mitochondrial from Arabidopsis with 77.13% of identity
• Blastx: Heat shock protein 90-6, mitochondrial from Arabidopsis with 80.22% of identity
• Eggnog: Molecular chaperone. Has ATPase activity (By similarity)(COG0326)
• Kegg: Link to kegg annotations (AT3G07770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435734.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF13589.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;