Id Trinity | TRINITY_DN49609_c1_g1_i4 |
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Name Transcript | Ll_transcript_416125 |
Sequence | ATAAACTATACATAAGATACATCCACACTCACTCAGTGAAACCCTAACAATGTCGACATTGGATACTATCTCAGAGGCACTGAACCTCATCGATTCGAAG AAACAGAATCTGAAGAAAGCATTCGACGATCTTCAATCCCAATCTTCTGTCGTCTCCAATTCTCTCCCTTTCTCCTGGCCCCACCTCGATTCCCACTTCT CTTCCATTCAATTCTCCCTCTCACAACGTTTCCATCTTCTCCAAACCCTAGATTCTAATCTTAACCCTCCTCAACCGTCACCGTCAAATTCACACCACCA AGCCCCCAGAGACGCCAACTTCACGCCGTTACCTAACGACCTATCTACACAGAACGACGGTTCAAGCGGCGTGTTCCCAAAAAACTACGTCGTTCCGAGT TCCGTTGTTCCTAGGTATGAGTTGAGTGTCCTGTGCGAGAAGATGGAAGGGAAAGGGTTGATAGATTACCTTATTGCCCACATCAGGGATAGGGTTGTGA TCGAGGCAGAGCTTACAGGGGCGTTGCGTTGTGCGCCAAATGCGGCCGAGATGGTTGTGGAATCATTTGAAGGGTATAATGAATGGGATAAAGATTGGAA AGATAGGGAAATGAAGTTGCTGAAGGGAAAGGGATGGAAATCGTGGAAGAGGAGTTGTATCATGCTGTTGAAACAGCTGAGGGTTGCAGCACCAATTGTT AGTTCGAAGACAAGGGAAAGAGCGTTGAAGGTGGCTAAGGAGTGGAAAGAGAGGATTGAGGTTAATCATAAGAATACTTTGGGAGTATTGGGATTTTTTC ACTTCGTGGCAGCGTATGGGTTGGTTTCTGATTTCAGTATGGATGAGCTTGTAGATTTTTCGACAAAGTATGGAGGAGTTGCTGAAAATGATGAATTTCC TGAGTTATGCAGGACCACTGGTTTGGCAGATAGAGTTCCTGATATTGTTCAGAAACTTATACAGAGGGGAAAACATATTCTGGCTGTAAAGTATGTATAC GCGTTTAATCTTGTTGATAAGATCCCACCAGTTTCCATTTTGAAAGCTTGTTTGCATGAGTCTAAGGAACTTTCTAAAAGACTTTCTGAGGAAGGAAAGC CACTGGTAACTATGTCCCCTTGATTTGTAACGTAATGCATGATACCACTGCCTATATTTATTGAGTTTTTTTTGCAGATGGAGATTACAGCTAGAGAAA BLAST |
Tissue | pods |
Gene name | LI_gene_170769; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_416125
Blastp | FRIGIDA-like protein 2 from Arabidopsis with 32% of identity |
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Blastx | FRIGIDA-like protein 1 from Arabidopsis with 32.34% of identity |
Eggnog | FRIGIDA like(ENOG410YI1U) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020232767.1) |
Pfam | Frigida-like protein (PF07899.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |