| Id Trinity | TRINITY_DN49609_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_416126 |
| Sequence | ATAAACTATACATAAGATACATCCACACTCACTCAGTGAAACCCTAACAATGTCGACATTGGATACTATCTCAGAGGCACTGAACCTCATCGATTCGAAG AAACAGAATCTGAAGAAAGCATTCGACGATCTTCAATCCCAATCTTCTGTCGTCTCCAATTCTCTCCCTTTCTCCTGGCCCCACCTCGATTCCCACTTCT CTTCCATTCAATTCTCCCTCTCACAACGTTTCCATCTTCTCCAAACCCTAGATTCTAATCTTAACCCTCCTCAACCGTCACCGTCAAATTCACACCACCA AGCCCCCAGAGACGCCAACTTCACGCCGTTACCTAACGACCTATCTACACAGAACGACGGTTCAAGCGGCGTGTTCCCAAAAAACTACGTCGTTCCGAGT TCCGTTGTTCCTAGGTATGAGTTGAGTGTCCTGTGCGAGAAGATGGAAGGGAAAGGGTTGATAGATTACCTTATTGCCCACATCAGGGATAGGGTTGTGA TCGAGGCAGAGCTTACAGGGGCGTTGCGTTGTGCGCCAAATGCGGCCGAGATGGTTGTGGAATCATTTGAAGGGTATAATGAATGGGATAAAGATTGGAA AGATAGGGAAATGAAGTTGCTGAAGGGAAAGGGATGGAAATCGTGGAAGAGGAGTTGTATCATGCTGTTGAAACAGCTGAGGGTTGCAGCACCAATTGTT AGTTCGAAGACAAGGGAAAGAGCGTTGAAGGTGGCTAAGGAGTGGAAAGAGAGGATTGAGGTTAATCATAAGAATACTTTGGGAGTATTGGGATTTTTTC ACTTCGTGGCAGCGTATGGGTTGGTTTCTGATTTCAGTATGGATGAGCTTGTAGATTTTTCGACAAAGTATGGAGGAGTTGCTGAAAATGATGAATTTCC TGAGTTATGCAGGACCACTGGTTTGGCAGATAGAGTTCCTGATATTGTTCAGAAACTTATACAGAGGGGAAAACATATTCTGGCTGTAAAGTATGTATAC GCGTTTAATCTTGTTGATAAGATCCCACCAGTTTCCATTTTGAAAGCTTGTTTGCATGAGTCTAAGGAACTTTCTAAAAGACTTTCTGAGGAAGGAAAGC CACTGATGGAGATTACAGCTAGAGAAACTCATACACTGAAATCAGCAATTAAAATTATTGAGAATCACAAACTTGAATCTGAATATCCACCAGCTAACCT GGAGCAGCGCATAGTGGAATTGAGGAGGCAAAAGAAGTCATTTATGAATAGTCGTTTAGCAGCTTCTGCCACAAGGACCCCTCAACAGCTACAGCCACAG CCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_170769; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_416126
| Blastp | FRIGIDA-like protein 2 from Arabidopsis with 31.57% of identity |
|---|---|
| Blastx | FRIGIDA-like protein 1 from Arabidopsis with 31.75% of identity |
| Eggnog | FRIGIDA like(ENOG410YI1U) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020232767.1) |
| Pfam | Frigida-like protein (PF07899.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |