| Id Trinity | TRINITY_DN49609_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_416128 |
| Sequence | GTCGAGAAGGTTCTGGAAGCAAAGCAAACCCCTTCTAAAACCCTACTTCGTTATAACTTCATCATTTCATCATTTCATCAATTCATCAATCATGCACAGA CTCTCTAGGCGTTGCTCCTCCCTCTCCGCCCTCCTCCGCCACGCCACTCCACTCCGCCGACCACTCTCTTCTTCTCACATCGCTTCGGTTGCTGATAATG ACACCAATTCTAGGTGCTATTCCGTGTTAGCCTCAGAGAAATCCACAAATAAGGTAGAGTTGAGAAGGGATCTGTTTTTAGGAAAGCGATATGAATCAAC TGCTGCAGAATCTTCTTCCTCCAATTCCCCACCAGCCGAGAGATACGAGTACCAAGCCGAGGTTAGTCGCCTCATGGACCTCATTGTTAACAGTTTATAC AGTAACAAGGAAGTGTTTCTTAGGGAGCTTATCAGCAATGCAAGTGATGCCTTGGATAAGCTGCGGTTTTTAAGTGTCACAGAGCCTGAACTAATGAAGG AAACACTTGATTTTGATATCCGGATTCAGACAGATAAAGATAATGGGATTATCACAATTACTGATTCAGGCATCGGTATGACCAGGCAAGAGCTTGTTGA TTGTCTTGGTACTATTGCTCAGAGTGGAACTGCGAAGTTTTTGAAGGCTCTAAAGGATAGCAAGGATGCTGGGGGTGACAACAACTTAATTGGTCAATTC GGTGTGGGATTTTATTCTGCTTTTCTGGTTGCTGATCGGGTGGTTGTCTCAACCAAGAGTCCAAAATCTGATAAACAATATGTTTGGGATGGAGAGGCAA ATGATAGCTCATATACTATTTCTGAGGAGACAGATCCTGAGAAGTTGATTCCAAGAGGAACCCGCCTTACTCTGCATCTGAAGAGGGATGCCAAAGATTT TGCTCATCCAGAGCGGATTCAAAAGCTTGTGAAAAACTATTCACAATTTGTCTCATTCCCAATATACACTTGGCAGGAAAAGGGATACACAAAAGAAGTG GAGGTTGATGAGGATCCAGCTGAAGCCAAGACGGATAACCAAGATGACAAGACTGAGAAGAAGAGGAAAACTAAGACTGTTGTTGAGCGTTATTGGGATT GGGAGCTAACAAATGAGACCCAACCAATCTGGCTTCGTAATCCGAAAGAAGTCACTAAGGAGGACTACAATGAGTTTTACAAGAATACCTTTAATGAATA CCTGGAGCCTTTAGCGTCGTCACACTTTACCACAGAGGGTGAGGTAGAATTTAGGTCTGTACTTTATGTGCCTGCTATTGCTCCTTCAGGGAAGGATGAC ATAATCAATCCCAAGACCAAGAATATAAGACTTCATGTGAAGAGAGTGTTCATTTCAGATGACTTCGATGGAGAACTGTTCCCTCGATACTTAAGCTTTG TCAAGGGTGTGGTTGACTCTAATGATCTTCCACTCAATGTGTCACGTGAAATTCTTCAAGAGAGCCGCATAGTGCGGATTATGAGGAAACGGTTAGTTCG AAAGGCTTTTGACATGATTCTGGGGATATCCATGAGCGATAACAGAGGGGTATTTTCTTAACTTATTCAGAATATTATTTGGTTACCAGAGAGAGGAGAA AAACATAAGTTTTGTTTAAAATTTGTAACTTCTCTTGTTAATGTGTCCTGACTATGTATTGCATGGAGTGAAGGCTTGCTTCACAAGTTCTTACTTGTAT AAATGAGATGAAGTAATATAAATGAACACAAATGGCTATAGATACATAATGATTAATTTGTATATAGTTTACCAATTTTGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_170769; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_416128
| Blastp | Heat shock protein 90-6, mitochondrial from Arabidopsis with 77.15% of identity |
|---|---|
| Blastx | Heat shock protein 90-6, mitochondrial from Arabidopsis with 80.65% of identity |
| Eggnog | Molecular chaperone. Has ATPase activity (By similarity)(COG0326) |
| Kegg | Link to kegg annotations (AT3G07770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435734.1) |
| Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF13589.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |