Ll_transcript_416366

• Id Trinity: TRINITY_DN49610_c0_g2_i10
• Name Transcript: Ll_transcript_416366
• Sequence: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACATTCTTCTTTGCATCAAAAGAGACAACATAAATGAATTAAC ACCCAACATCTTCACTCCTTATTCTTCTTTCTATTAAGACCAACACTTTCAATTCAAACCACCCCTTTTACTTTCTCCCTCGCATAAGATAGATATTAGA AAGATGGCATCAGCAGAAGCAGCTTCTGATGGGGCTGGTCCGAGATATGCACCTGATGATCCTACTCTTCCACAGCCATGGAAGGGTTTGATCGATGGTA GCACCGGTGTGATGTACTACTGGAATCCTGAAACCAATGATACTCAGTATGAAAGACCAGCTCCTTTGGCCCCACCTGTGCCTTCGGGGCCCACACCCGG GGCGTCTACGCCGAGCTTGGCGCCCATACCGGGTGCTCACATGGTACAACCTAGTGGGGTGGTGGCACAGAATGGGCAAGCGCACTCGTCACAACAACAG CAGGGGAGTCACCTCAGCCAACAATATGGGCAACCGATGCTGCAGCACCAGCCTTCTCAGGCTGGCCAATCTGCACAGCAGCAGAATTCTCAGATGTCAC AGTCTGCGCCACAGCCGGGATATCAAGCCAGACCACATTTGATGCATGCTCAAGGACAACAAATGATGCATCCTCAAGGACAGCAAATGCATTATCAGAT GCCGTCGCCGCATTCCCAGCATTATGGGCAAGGACCACCTCAGGATCATAGCTCGCTTAACATGCAACCACAAGCACCTCAATTCACTCCCCAGAACATG CAGTATATGTCATATCAGCAAAACATGATTCAATCTGGGCAACCGAATTCCCTGCCGATGCAGCCGAACATGAATACCTCTGGGCAACCTAACTCCCAGC ACATTCAGCATCATATCATGCATGGTCAGCCCCCTTTTGAAAGTCAACAAGATTATAAAGCAGCTTATCCAAAGACAGAGGAAACGGAGTTTAAAAATGG AAGCCAAACTGGACATTCACCATCCCAGTATCAACAAAGAAGTGGTTTGCCTGTTCAAAACAATCAGAGTGTTCCTGCTGATATCACTTCTCATCAATTG CCAAACATAGGTGTTAATGCTGGCCACCCACAACAGTTCAGGGGTTTATCAGGAAACATGCATCAGTCTCCCTCGGCACTGCAGTCGCCGCAGGGTGGTT CTGATTTATTTTACCAACATGGTCCTCGTCCTAACTTTCAAAACCAGATGAGTCCTGGAATGATGCATGGGCATCCACCCAATATCCATCCTGGTGGACA AAAAATGGGACACGAGGACAATTTACGTGGTCGACCTGGGAATGAATATCACTATAATTCTAGCAAGGAGATGCCGACAATGGGTCGTCATCAGCCAGAT ATGGCACAAATACCCGTTTCAGGAGGCCAGAAGGATATAATGCCTGGGGGAAGTGGAATTGCCAGGAATTCTATGCAAAACATGTTCACTCCTCCAACGG GACCTCCATCTTTTTCAAGTAATGCTTCGATAAGGCCTCCTTATATTGGATCTTCAGATGCCTCGGGTCTCTCACAAGCTGAACTTTACTGCCAGCAACA TGAAGTTACAGCAACAGGAGACAACATTCCACCCCCTTTTATGTCATTTGATGCCGCTGGGTTTCCTCCGGAGTTATTGAGGGAGGTAAGTCTATTCTTT CCTGTTATATGGTATTGCATGATTTGGTACTTCCTAGGAAAGTAATGGTTTTATTCCTCCCCCCTTCTTTTAACTTAAACATTACTTTTAAACTTATATT TTCTCGCTTGTCGCAGGTGCGATATCTGCTCCAGAGCAGGAGCATATGTCGTACGCTGCACTGCTAATCTGCTATTGGCACACTTACACGTGCAACTACT ATTCCGATTTTTGGAGCCTGCTAAACGGATGTTTGGAACCTTTCTTGAGCATCTTCTATAAGGGTGGATGGCCCTTCATTCAAATTTCACCTCATGTGAC GTGGGATTTGTTGATTGATATTGGCTCCGCCTCTTATGTCTTTTTTGCCTTTTTTAATTGCCTCAAGTTGCTTCAATATATTCTGCTGGCTTCTCCAATC CTACGCCAATTCAGGCTCAAACATGGCCCGTTGCACTACAGGGTAGAGACATAGTGGCAATTGCCAAAACAGGCTCTGGGAAAACATTGGGCTATATAAT TCCTGCCTTCCTTCTTCTTAAACAGCGGCATAATAATGCCCTAAATGGCCCTACTGTTCTGGTTTTGGCTCCAACACGTGAACTTGCAACACAGATCCAA GACGAGGTCCTTAAATTTTGCCGTTCTTCACGGGTCTCTTGCACGTGCTTGTATGGTGGAGCACCTAAAGCTCTCCAGCTAAAAGAACTAGATCGGGGAG TAGACATTGTTGTTGCCACACCTGGGCGCCTCAATGATATACTTGAAATGAAGAAAATTGACTTCAGGCAAGTTTCACTCCTTGTGCTTGATGAGGCTGA CCGGATGCTTGATATGGGGTTTGAACCTCAAATTCGTAAGATTGTGAATGAGATTCCTCCACACAGACAAACTCTAATGTATACAGCAACCTGGCCAAAA GAAGTAAGGAAAATTGCCAGTGATTTGCTTGTTAATCCTGTCCAGGTTAACATTGGAAGTGTAGATGAGCTTGCTGCAAATAAATCTATCACCCAGTATG TTGAAGTTGTATCACAAATGGAGAAACAGAGGCGTTTGGAGGAGATCCTCAGTCAGCAAGAACGAGGTTCTAAGATTATAATATTTTGTTCCACAAAGAG GTTATGTGATCAGCTTGCCCGTGGTATTGGCCGTAGTTTTGGGGCTGCTGCAATTCATGGAGACAAGTCTCAAGGTGAGAGAGACTATGTCTTAAATCAA TTCCGATCTGGGAAGTCACCAATTTTGGTTGCCACTGATGTTGCTGCTCGTGGGCTTGACATTAAGGATATAAGGGTGGTGATCAACTATGATTTCCCCA ATGGAGTTGAGGACTATGTACACCGTATCGGAAGAACTGGAAGGGCAGGTGCTACTGGAGTGGCATATACCTTTTTCTCTGAGCAGGATTGGAAGCATGC TGGTGATTTAATCAAAGTTTTGGAGGGTGCTAACCAGCATGTGCTTCCACAATTGAGAGATATAGCTTCGCGTGGGCCGCCCAACTATGCAAAGGATCGG GGTGGAATGAATCGCTTTGATTCTGGTGGTCGTGTTGGTGGGCGCTGGGAGGCTGGTGGTCGTGGTGGGATGAGAGATGGTGGCTCTGGTGGTCGTGGTG GGATGAGAGATGGTGGCTTTGGTGGTCGTGGTGGCATGAGAGATGATGGCTTTGGTGGTCGTGGTGGCATGGGTGATGGTGGGGGGTTTGGTGGTCCTCC TGGTGGCATGAGGGACAGTGGGTTTGGTGGTCATCCTGGTGGCATGAGGGAAGGTGGGTTTGGTGGTCGCGGTGGCATGAGGGATGGAGCTGGTGGGCGA GGCGATTTCTTTTCTGGTAGGGGCAACAGAGGTAGGGGATTTGATGGCCCTCGTGGAGGTAATGTTGGTTGGGGTCGGGGTGAACAGGGTCCGAATGACC GTTACAGCATGGATGGGCGTGGACGAGGGCGTGGGCGTGGACGATTTGACAATAGAAGAGACGCTGGTTTCAGAAACAGAGGCCGGAGTACTAGTCGTAG TCCTGAAAGAGTTCGGACATGGGATGCTAGCAGCAGAAGCCGCAGTAGAAGCCGCAGTAGAAGTAGAAGCTGGAGTCGGGGTCGCAGCCGCAGCTACAGC CGTAGCATTAGCCCGCGTAGGAGCCGTAGCCGCAGCCGTGGTCGTAGAAGTTACAGCCGCAGCCATAGTCGTGGCCGTAGAAGTTACAGCCGCAGCCGTA GCCCGGCTGTCAATGTCAGGCGCAATAGGCCAAGTAAGTTCTCTGATACGGCACCAGAAGTAGGAGCTGCTGATCCTATAATATTGGGAGCTGAACATGT GGAGCAGGTACCTGTTGCTGGGAGTACAGGCCCAGATAATCCAGAAGCTGTAGGAGACCTTCCTCATCAATCAGGTTCTGGTGTTTGAAGCTGCTATGCA AATCTCAATTTTGAAAAGGGCATTGACTTTTTATCCATTGAGTGGTGACTATGTTAACCTCTCACTTTTGTTATGATTGGTTTTACATGGTGATATTGAT TACCTTATCACAAAAAGAGTGTTATTATTATGATATATTGCTGCTTTGTTGAAAGAGTTAATGTTTGGTTTAACAATAGTCAGACTTAGTTCATTCCATC AATTTGTGGTGATTCATTTCTTTTATAATGTACTTGTGTTGTTGAATTGGGATAAACAATTATGTTGGCTTCTTTTATCAATTATTTTAGTAGGTAGATT AGATTTGTTTAATAAAAA
• Tissue: pods
• Gene name: LI_gene_170780;
• Additional information: details;

Expression of Ll_transcript_416366

FPKM

• PAB: 0.9
• PNAB: 1.7
• PS1: 2
• PS2: 0.8
• PS3: 1.4
• PW1: 0.7
• PW2: 1
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416366

• Blastp: DEAD-box ATP-dependent RNA helicase 40 from Arabidopsis with 83.21% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 40 from Arabidopsis with 83.25% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT3G06480)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425567.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;