Ll_transcript_416371

• Id Trinity: TRINITY_DN49610_c0_g2_i15
• Name Transcript: Ll_transcript_416371
• Sequence: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACATTCTTCTTTGCATCAAAAGAGACAACATAAATGAATTAAC ACCCAACATCTTCACTCCTTATTCTTCTTTCTATTAAGACCAACACTTTCAATTCAAACCACCCCTTTTACTTTCTCCCTCGCATAAGATAGATATTAGA AAGATGGCATCAGCAGAAGCAGCTTCTGATGGGGCTGGTCCGAGATATGCACCTGATGATCCTACTCTTCCACAGCCATGGAAGGGTTTGATCGATGGTA GCACCGGTGTGATGTACTACTGGAATCCTGAAACCAATGATACTCAGTATGAAAGACCAGCTCCTTTGGCCCCACCTGTGCCTTCGGGGCCCACACCCGG GGCGTCTACGCCGAGCTTGGCGCCCATACCGGGTGCTCACATGGTACAACCTAGTGGGGTGGTCGCACAGAATGGGCAAGCGCACTTGTCACAACAACTG CAGGGGAGTCATCTCGGCCAACAATATGGGCAACCGATGCTGCAGCACCAGCCTTCTCAGGCTGGCCAATCTGCACAGCAGCAGAATTCTCAGATGTCAC AGTCTGCGCCACAGCCGGGATATCAAGCCAGACCACATTTGATGCATGCTCAAGGACAACAAATGCATTATCAGATGCCGTCGCCGCATTCCCAGCATTA TGGGCAAGGACCACCTCAGGATCATAGCTCGCTTAACATGCAACCACAAGCACCTCAATTCACTCCCCAGAACATGCAGTATATGTCATATCAGCAAAAC ATGATTCAATCTGGGCAACCGAATTCCCTGCCGATGCAGCCGAACATGAATACCTCTGGGCAACCTAACTCCCAGCACATTCAGCATCATATCATGCATG GTCAGCCCCCTTTTGAAAGTCAACAAGATTATAAAGCAGCTTATCCAAAGACAGAGGAAACGGAGTTTAAAAATGGAAGCCAAACTGGACATTCACCATC CCAGTATCAACAAAGAAGTGGTTTGCCTGTTCAAAACAATCAGAGTGTTCCTGCTGATATCACTTCTCATCAATTGCCAAACATAGGTGTTAATGCTGGC CACCCACAACAGTTCAGGGGTTTATCAGGAAACATGCATCAGTCTCCCTCGGCACTGCAGTCGCCGCAGGGTGGTTCTGATTTATTTTACCAACATGGTC CTCGTCCTAACTTTCAAAACCAGATGAGTCCTGGAATGATGCATGGGCATCCACCCAATATCCATCCTGGTGGACAAAAAATGGGACACGAGGACAATTT ACGTGGTCGACCTGGGAATGAATATCACTATAATTCTAGCAAGGAGATGCCGACAATGGGTCGTCATCAGCCAGATATGGCACAAATACCCGTTTCAGGA GGCCAGAAGGATATAATGCCTGGGGGAAGTGGAATTGCCAGGAATTCTATGCAAAACATGTTCACTCCTCCAACGGGACCTCCATCTTTTTCAAGTAATG CTTCGATAAGGCCTCCTTATATTGGATCTTCAGATGCCTCGGGTCTCTCACAAGCTGAACTTTACTGCCAGCAACATGAAGTTACAGCAACAGGAGACAA CATTCCACCCCCTTTTATGTCATTTGATGCCGCTGGGTTTCCTCCGGAGTTATTGAGGGAGGTGCGATATCTGCTCCAGAGCAGGAGCATATGTCGTACG CTGCACTGCTAATCTGCTATTGGCACACTTACACGTGCAACTACTATTCCGATTTTTGGAGCCTGCTAAACGGATGTTTGGAACCTTTCTTGAGCATCTT CTATAAGGGTGGATGGCCCTTCATTCAAATTTCACCTCATGTGACGTGGGATTTGTTGATTGATATTGGCTCCGCCTCTTATGTCTTTTTTGCCTTTTTT AATTGCCTCAAGTTGCTTCAGTAAGCAACCAAAACCCGTGTCCTTTTGTTCATTGTCTGCTAAATTATTGGCACTGTTGAATGTAGTTTTGTGTTTCCTA AATCAATTGACATTGGATGTCTTAACTGTTCATTGGCCTGATTGCCTGCCATATGCTCTCATTTCAGATATATTCTGCTGGCTTCTCCAATCCTACGCCA ATTCAGGCTCAAACATGGCCCGTTGCACTACAGGGTAGAGACATAGTGGCAATTGCCAAAACAGGCTCTGGGAAAACATTGGGCTATATAATTCCTGCCT TCCTTCTTCTTAAACAGCGGCATAATAATGCCCTAAATGGTCCTACTGTTTTGGTTTTGGCTCCAACACGTGAACTTGCAACACAGATCCAAGAGGAGGT CCTTAAATTTTGTCGTTCTTCACGGGTCTCTTGCACGGTTTGTCCTGAGCACTTCTACCTCATTTTTTCTTTGAAGTGTTATTCTATTAGTTTTTTGGCC ATAGTTTTTGATGCATCTCTAGGTTTTGTTTCCCTTTGTTGCATCTCATGTTTTTTTTCCCTTTGTAGTGCTTGTATGGTGGAGCACCTAAAGCTCTCCA GCTAAAAGAACTAGATCGGGGAGTAGACATTGTTGTTGCCACACCTGGGCGCCTCAATGATATACTTGAAATGAAGAAAATTGACTTCAGGCAAGTTTCA CTCCTTGTGCTTGATGAGGCTGACCGGATGCTTGATATGGG
• Tissue: pods
• Gene name: LI_gene_170780;
• Additional information: details;

Expression of Ll_transcript_416371

FPKM

• PAB: 1
• PNAB: 1.3
• PS1: 0.9
• PS2: 0.4
• PS3: 0.9
• PW1: 0.6
• PW2: 0.6
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416371

• Blastp: DEAD-box ATP-dependent RNA helicase 40 from Arabidopsis with 56.19% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 40 from Arabidopsis with 75.82% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT3G06480)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425567.1)
• Pfam: WW domain (PF00397.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;