Ll_transcript_416373

• Id Trinity: TRINITY_DN49610_c0_g2_i16
• Name Transcript: Ll_transcript_416373
• Sequence: CATCCTGCAGCTATGAAAGTCATTAACAAGTGGTGTGCGTTGCCACAAAACATTTAGCCTCAGGTGTGTGGTTTCTGGTTTCTCCACGTATGTTATACGG ATAATAAAGCACCCATTCCCGCCACATCATAATTTCCTTCTAATCTTTCTTTCCTTCTGTCCTCTCGGGAACACGCAACGCAACTTCTACTATTTCACTC TGCTGCGGTAACTGAACTTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTTGCATCCACTACATGGCAGTTATATTGAACAGCAACAACAAT TTTCTATCGCTAAGCTCTTCGAATTGTTGGCTTTTGGATGGCTCCCCTTGTACAGGCAGAAAATTTTCAGATTTGCATTTCCTATGGCTATGTAAATGGG ATTATTCAAGAAAAGGACGCCTAATACGACATGCTTTGTTATCAAATGGTAGTCATGGTTTGGTGGGCTGTAGGGAATACAATATAACATTTTCTAAACC CAGACGAATGGCTCACCTTTTCCCATTTGCCTCTGCTGATGACGGTGTGACTGTCAATGGGAGTCCCCAAGCTAGCACCAGCACTGACCTTGAGAAAATG AGGGTGAAACTTAATAGTTCACTGGAAGATGTAGACTTCTGTGATGGACTTGTGCAAGCTTTATATGATGCAGCCAGGGTTTTTGAGCTGGCAATTAAAG AGCATAAATCGTTCCCAGGAGTGTCTTGGTTTTCAACAGCCTGGCTCGGGGTAGACCAAAATCCATGGGTGAAAACACTGTCATATCAGGCGGCTGTGTT CTCCTTATTGTATGCTGCAAGTGAAATATCATCTCGAAGTGATGGAAGAGACATGAATATCAATGTCTTTGTTCAAAGAAGTTTGCTAAGGCTATCTGCT CCCCTGGAAAGTTTAATTAGAGAAAAATTATCAGCCAAACAGCCTGAAGCATATGAATGGTTTTGGTCTGAGCAAGTTCCAGCTGTTGGGACATCCTTTG TTAATAAGTTTGTTGGGGACGGACGCTTTACTGCTGCCTTTGCTTTGTCTGGAAGAAATATTAGTTCAAGTAGTGCAGGTGACTTGTCACTTCTCATGCT TGCACTAACATGCATTGCTGCAATTGTGAAACATGGCCCCACTAAAGTTTCTTGTTCACAACTCTTTTCCATGATCACTGAGATAAATGGTAGCCTGATG GACATGTTGGTTGGTTTAATTCCTGTAAGCCAAGCTTACAATTCTATAAAGGATATTGGTCTACAAAGAGAATTTCTTCTTCATTTTGGTCCCAGAGCTG CATCTTGTAGAGCAAATGTTGAGTGGGGTTCAGAAGAGGTTGTTTTCTGGGTAAATCTTGCTCAGAGGCAGCTGCAGGAAGCTGTTGATAAGGAGAAAAT ATGGTCAAGATTGACAACATCCGAAAGTATTGAGGTTTTGGAGAAGGATCTGGCTATATTTGGGTTCTTTATTTCTTTAGGCAGAAGCACTCGGTACTTC CTTTTAGAAAATGGTTTTGACACTCTAGAGGAACCAATTGAAGATTTCATCAGGTATCTTATTGGAGGGAGTGTTTTATATTACCCACAACTGTCGTCCA TTAGTTCCTATCAATTGTATGTTGAGGTAGTTTGTGAAGAGTTGGATTGGCTTCCCTTTTATCCGGGAATTACGAGCATTACAAAAAAGTTACATACACA TGGAAGTAAAGAAGACTGTCCTCCAAATGCTGAAGCAGTGCCCCAAGTATTTGATGTTTGCTCCCATTGGATCCAGAGCTTTATTAAATACAGTACATGG CTGGAGATCCCCTCAAATGTGAAAGCAGCTGAATTTCTGTCAAAAGGGCACGAGAAGTTGATGAAGTGCAGGGAAGAACTGGGGATTAGAAAGGATAAGA CATTGGATGGTGATACGACAAGAACAGTTAACAAAAATAGATCCACAATTCAGTCAACTACAGAGGAGTCAGCTTCTTTTGATGAGGCACTGAAAAGTGT TGAAGAAGCTGTGCTAAGACTTGAAAAGTTGCTTCAAGAATTGCATGTATCCAACTCGAGCTCTGGGAAAGAGAATTTGAAAGCAGCTTGTTCTGACCTG GAAAAAATACGAAAACTTAGAAAAGAAGCTGAATTCTTTGCAGCATCTTTCAGAGCGAAAGCTGACTCTCTGCAACAGGGAGTTAATGGTGGCCGGCCCC ACACACCAGCTGGTGAAGAGAGAGGGTATATAAAAGGGAAAAGCAGAAAGAATGCTAATATAAGGGTGGAAAGTAATGAAAGAAGTGCTGGAAAATCTAG TGGATTCTGGAACATCATTGTGCGCCCTGCCAGAAAGCCTGATCTGGAATCTGATGTGGATGCTTATGAAAGTAATATTGAGCAGTGTACACCAAAAGTA GGGGATTTTGTCCAAGAATCCAGTGAAATCAACCGCTTTGAATATCTGAGAAATGAGCTAATAGAACTTGAGGAACGGGTTCAAAAAAGTGCCTACCGAT CAGAAGATAATGAGGAATTGGTGGTTATTGATGGTGGTTCCCGCTACAATGATGATTCTGGAGCTTTTCAAATTGTCAGGAGCCAGAAGAAAGAAAACAT CATAGCGAAATCTTTGGACAAATTAAAAGAAACTGGAACAGATGTCTGGCAAGGAACTCAACTTCTAGCTATCGATGTTGCTGCTGCCACAGGTTTGTTC AGAAGGTCCCTGATAGGGGATGAATTGACTGAGAAGGAAAAGAAAACACTTAAAAGAACCTTGACTGACATGGCTTCTGTTGTTCCAATTGGTATTTTAA TGCTGCTTCCGGTTACTGCCGTTGGTCATGCAGCCATGTTGGCCGCAATTCAGAGATATGTACCATCTCTGATTCCATCTACTTATGCTCGGGAAAGGTT GGATCTCATGAGGCAGCTTGAGAAAATGAAACAAATGACAGCTATTGATGTGGACTCAGATGAGGAAGTGGATGAAGTTAAATGATCAAGAAGCAATTCA GATTTATGTACAGCTAGTTAAACTAAACATTCTATGGTCTCTCAGAAGTTGGATTGGCTTTGATCTCCACTTTCTGGGTTGAGTCCAAATTTCATGTAGA GTAAGTAATTGAGCATGGAGAAGTTCATTCCATGTGTTTGGCACTCCAGGTAAGCACCAATGGCTACAATCCTGAGTAGTGTCCCGTGCAGTGCCTGGTT GACCATCTTTCCTCAACTCTGAAAAAATGTGATGTTCAAAAACTAGATTTTCCAGCTCCCATGTTGCATCTGTTTGACAACCTCAGATATAATGTGTTAT ATTATGGTTCTATTTCGTTTTGTAAAGTCCTTTTCTGGTTCTGTTTCCCTGTTATTGTTTCAGCTTTCATTCCATTTCCCATTCTTACAAATTCTCAGTG GAGTTATGACAACTTATCCAAATGTACACTGAAAAGGAAATTCCACTTTCCTAGGTATAGATGGCAATATGGTCACTGTCTTGGGCCGGCTCATATTGCC CACAAAAAATGCAGGCAGGGTATTCATATTTAGCCCAGTAGCTCATCTCCCCAGCCCGCCTGTCCATTAAATTTGCGGACATTTCAAGTAGGCTGAATGG GCAGCCTGCGGGCATACAATAAACGACCCAAAATCTTCATTCTTCAAGGCCCATAATCCTATCTTGCATTTGATTTCTTTCTTTTCTCAAATCTCAATTT CTCACGAATTTCATTTTATTTCAGTGATAACTGACAACCTCGTGCTCATTACTTTCATTCCATATCTCATTATGTTCCATTTTTTCCATTTCCTTTCTTT CATTCTTCATTTCTTCCCTGTTCCATTCTTCTATTTTGTTTCTTTCATTCTAACATTTCTCCCCTTCCATTCGTCTCCCATTTCTTTCAATTTTCCCCAA TTCAATTGTTCTGATTATGAATCTCTATTTTCAATTTATTACCCAATCTTACGTCTGGATTGTTTTCAATTTATGAATATGTTTTCAACGGTTAGCTGTT AATGAATATCACCACTACCATGTTTAGGTTCTGATAGCACATCCGACGTGAGCTCTTGCTGGATATCACCAATCTTATTAATTATGTATATAAGTTTGTG GGTAAAGTTGCATTATTGAAGGCGGAGAAAACAGGTTTGTTGTTTTAGTTAAATTAGTTATGGCCCATGGGTCGCTCCTATTTCCGTTTTGCCCATTTTA AAATGGGCGGTGCATGGAATTTTGTCCATTAAGTGTATGTGACTATGTGGACATAATCATGCCCACTTAAGTTTGTGCAGGCATGGCTGAAATGGGCCGG GCGGCCCATTTTGCCTTATCTAATCCTAAGGTTTTCCTCGTTTCCTATGTAATCCATCTAGTCCCCCACTTGTGTCGTTATTGCAGATAAACCCATGAAT TAGAGGGTTATAAGGTAGTCATGTGGTTAGGGTGGAGGGTAAGGAGCGGAATGATAAAGAGGACAAAGGTTCAAATCTTATCTATTAAAATGTATTTGAT TGTGCATAAAAGATAAGCATGTAAATAGCAGATAAAAAATTGTTTAGATTTGTACAAAATATCACTACAAATGCATTGTGGAAAATTTTAGAAAACATCA AACAAATATAGGTAGG
• Tissue: pods
• Gene name: LI_gene_170780;
• Additional information: details;

Expression of Ll_transcript_416373

FPKM

• PAB: 22.4
• PNAB: 16.5
• PS1: 10.5
• PS2: 8.1
• PS3: 10.8
• PW1: 11.9
• PW2: 15.5
• PW3: 15.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416373

• Blastp: LETM1 domain-containing protein YLH47, mitochondrial from Saccharomyces with 27.2% of identity
• Blastx: Protein trichome birefringence-like 8 from Arabidopsis with 59.18% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YPR125W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442999.1)
• Pfam: LETM1-like protein (PF07766.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;