Ll_transcript_416375

• Id Trinity: TRINITY_DN49610_c0_g2_i18
• Name Transcript: Ll_transcript_416375
• Sequence: CATCCTGCAGCTATGAAAGTCATTAACAAGTGGTGTGCGTTGCCACAAAACATTTAGCCTCAGGTGTGTGGTTTCTGGTTTCTCCACGTATGTTATACGG ATAATAAAGCACCCATTCCCGCCACATCATAATTTCCTTCTAATCTTTCTTTCCTTCTGTCCTCTCGGGAACACGCAACGCAACTTCTACTATTTCACTC TGCTGCGGTAACTGAACTTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTTGCATCCACTACATGGCAGTTATATTGAACAGCAACAACAATTTTC TATCGCTAAGCTCTTCGAATTGTTGGCTTTTGGATGGCTCCCCTTGTACAGGCAGAAAATTTTCAGATTTGCATTTCCTATGGCTATGTAAATGGGATTA TTCAAGAAAAGGACGCCTAATACGACATGCTTTGTTATCAAATGGTAGTCATGGTTTGGTGGGCTGTAGGGAATACAATATAACATTTTCTAAACCCAGA CGAATGGCTCACCTTTTCCCATTTGCCTCTGCTGATGACGGTGTGACTGTCAATGGGAGTCCCCAAGCTAGCACCAGCACTGACCTTGAGAAAATGAGGG TGAAACTTAATAGTTCACTGGAAGATGTAGACTTCTGTGATGGACTTGTGCAAGCTTTATATGATGCAGCCAGGGTTTTTGAGCTGGCAATTAAAGAGCA TAAATCGTTCCCAGGAGTGTCTTGGTTTTCAACAGCCTGGCTCGGGGTAGACCAAAATCCATGGGTGAAAACACTGTCATATCAGGCGGCTGTGTTCTCC TTATTGTATGCTGCAAGTGAAATATCATCTCGAAGTGATGGAAGAGACATGAATATCAATGTCTTTGTTCAAAGAAGTTTGCTAAGGCTATCTGCTCCCC TGGAAAGTTTAATTAGAGAAAAATTATCAGCCAAACAGCCTGAAGCATATGAATGGTTTTGGTCTGAGCAAGTTCCAGCTGTTGGGACATCCTTTGTTAA TAAGTTTGTTGGGGACGGACGCTTTACTGCTGCCTTTGCTTTGTCTGGAAGAAATATTAGTTCAAGTAGTGCAGGTGACTTGTCACTTCTCATGCTTGCA CTAACATGCATTGCTGCAATTGTGAAACATGGCCCCACTAAAGTTTCTTGTTCACAACTCTTTTCCATGATCACTGAGATAAATGGTAGCCTGATGGACA TGTTGGTTGGTTTAATTCCTGTAAGCCAAGCTTACAATTCTATAAAGGATATTGGTCTACAAAGAGAATTTCTTCTTCATTTTGGTCCCAGAGCTGCATC TTGTAGAGCAAATGTTGAGTGGGGTTCAGAAGAGGTTGTTTTCTGGGTAAATCTTGCTCAGAGGCAGCTGCAGGAAGCTGTTGATAAGGAGAAAATATGG TCAAGATTGACAACATCCGAAAGTATTGAGGTTTTGGAGAAGGATCTGGCTATATTTGGGTTCTTTATTTCTTTAGGCAGAAGCACTCGGTACTTCCTTT TAGAAAATGGTTTTGACACTCTAGAGGAACCAATTGAAGATTTCATCAGGTATCTTATTGGAGGGAGTGTTTTATATTACCCACAACTGTCGTCCATTAG TTCCTATCAATTGTATGTTGAGGTAGTTTGTGAAGAGTTGGATTGGCTTCCCTTTTATCCGGGAATTACGAGCATTACAAAAAAGTTACATACACATGGA AGTAAAGAAGACTGTCCTCCAAATGCTGAAGCAGTGCCCCAAGTATTTGATGTTTGCTCCCATTGGATCCAGAGCTTTATTAAATACAGTACATGGCTGG AGATCCCCTCAAATGTGAAAGCAGCTGAATTTCTGTCAAAAGGGCACGAGAAGTTGATGAAGTGCAGGGAAGAACTGGGGATTAGAAAGGATAAGACATT GGATGGTGATACGACAAGAACAGTTAACAAAAATAGATCCACAATTCAGTCAACTACAGAGGAGTCAGCTTCTTTTGATGAGGCACTGAAAAGTGTTGAA GAAGCTGTGCTAAGACTTGAAAAGTTGCTTCAAGAATTGCATGTATCCAACTCGAGCTCTGGGAAAGAGAATTTGAAAGCAGCTTGTTCTGACCTGGAAA AAATACGAAAACTTAGAAAAGAAGCTGAATTCTTTGCAGCATCTTTCAGAGCGAAAGCTGACTCTCTGCAACAGGGAGTTAATGGTGGCCGGCCCCACAC ACCAGCTGGTGAAGAGAGAGGGTATATAAAAGGGAAAAGCAGAAAGAATGCTAATATAAGGGTGGAAAGTAATGAAAGAAGTGCTGGAAAATCTAGTGGA TTCTGGAACATCATTGTGCGCCCTGCCAGAAAGCCTGATCTGGAATCTGATGTGGATGCTTATGAAAGTAATATTGAGCAGTGTACACCAAAAGTAGGGG ATTTTGTCCAAGAATCCAGTGAAATCAACCGCTTTGAATATCTGAGAAATGAGCTAATAGAACTTGAGGAACGGGTTCAAAAAAGTGCCTACCGATCAGA AGATAATGAGGAATTGGTGGTTATTGATGGTGGTTCCCGCTACAATGATGATTCTGGAGCTTTTCAAATTGTCAGGAGCCAGAAGAAAGAAAACATCATA GCGAAATCTTTGGACAAATTAAAAGAAACTGGAACAGATGTCTGGCAAGGAACTCAACTTCTAGCTATCGATGTTGCTGCTGCCACAGGTTTGTTCAGAA GGTCCCTGATAGGGGATGAATTGACTGAGAAGGAAAAGAAAACACTTAAAAGAACCTTGACTGACATGGCTTCTGTTGTTCCAATTGGTATTTTAATGCT GCTTCCGGTTACTGCCGTTGGTCATGCAGCCATGTTGGCCGCAATTCAGAGATATGTACCATCTCTGATTCCATCTACTTATGCTCGGGAAAGGTTGGAT CTCATGAGGCAGCTTGAGAAAATGAAACAAATGACAGCTATTGATGTGGACTCAGATGAGGAAGTGGATGAAGTTAAATGATCAAGAAGCAATTCAGATT TATGTACAGCTAGTTAAACTAAACATTCTATGGTCTCTCAGAAGTTGGATTGGCTTTGATCTCCACTTTCTGGGTTGAGTCCAAATTTCATGTAGAGTAA GTAATTGAGCATGGAGAAGTTCATTCCATGTGTTTGGCACTCCAGGTAAGCACCAATGGCTACAATCCTGAGTAGTGTCCCGTGCAGTGCCTGGTTGACC ATCTTTCCTCAACTCTGAAAAAATGTGATGTTCAAAAACTAGATTTTCCAGCTCCCATGTTGCATCTGTTTGACAACCTCAGATATAATGTGTTATATTA TGGTTCTATTTCGTTTTGTAAAGTCCTTTTCTGGTTCTGTTTCCCTGTTATTGTTTCAGCTTTCATTCCATTTCCCATTCTTACAAATTCTCAGTGGAGT TATGACAACTTATCCAAATGTACACTGAAAAGGAAATTCCACTTTCCTAGGTATAGATGGCAATATGGTCACTGTCTTGGGCCGGCTCATATTGCCCACA AAAAATGCAGGCAGGGTATTCATATTTAGCCCAGTAGCTCATCTCCCCAGCCCGCCTGTCCATTAAATTTGCGGACATTTCAAGTAGGCTGAATGGGCAG CCTGCGGGCATACAATAAACGACCCAAAATCTTCATTCTTCAAGGCCCATAATCCTATCTTGCATTTGATTTCTTTCTTTTCTCAAATCTCAATTTCTCA CGAATTTCATTTTATTTCAGTGATAACTGACAACCTCGTGCTCATTACTTTCATTCCATATCTCATTATGTTCCATTTTTTCCATTTCCTTTCTTTCATT CTTCATTTCTTCCCTGTTCCATTCTTCTATTTTGTTTCTTTCATTCTAACATTTCTCCCCTTCCATTCGTCTCCCATTTCTTTCAATTTTCCCCAATTCA ATTGTTCTGATTATGAATCTCTATTTTCAATTTATTACCCAATCTTACGTCTGGATTGTTTTCAATTTATGAATATGTTTTCAACGGTTAGCTGTTAATG AATATCACCACTACCATGTTTAGGTTCTGATAGCACATCCGACGTGAGCTCTTGCTGGATATCACCAATCTTATTAATTATGTATATAAGTTTGTGGGTA AAGTTGCATTATTGAAGGCGGAGAAAACAGGTTTGTTGTTTTAGTTAAATTAGTTATGGCCCATGGGTCGCTCCTATTTCCGTTTTGCCCATTTTAAAAT GGGCGGTGCATGGAATTTTGTCCATTAAGTGTATGTGACTATGTGGACATAATCATGCCCACTTAAGTTTGTGCAGGCATGGCTGAAATGGGCCGGGCGG CCCATTTTGCCTTATCTAATCCTAAGGTTTTCCTCGTTTCCTATGTAATCCATCTAGTCCCCCACTTGTGTCGTTATTGCAGATAAACCCATGAATTAGA GGGTTATAAGGTAGTCATGTGGTTAGGGTGGAGGGTAAGGAGCGGAATGATAAAGAGGACAAAGGTTCAAATCTTATCTATTAAAATGTATTTGATTGTG CATAAAAGATAAGCATGTAAATAGCAGATAAAAAATTGTTTAGATTTGTACAAAATATCACTACAAATGCATTGTGGAAAATTTTAGAAAACATCAAACA AATATAGGTAGG
• Tissue: pods
• Gene name: LI_gene_170780;
• Additional information: details;

Expression of Ll_transcript_416375

FPKM

• PAB: 0.7
• PNAB: 1.4
• PS1: 0.8
• PS2: 0.6
• PS3: 0.9
• PW1: 0.3
• PW2: 0.3
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416375

• Blastp: LETM1 domain-containing protein YLH47, mitochondrial from Saccharomyces with 27.2% of identity
• Blastx: Protein trichome birefringence-like 8 from Arabidopsis with 59.18% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YPR125W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442999.1)
• Pfam: LETM1-like protein (PF07766.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;