| Id Trinity | TRINITY_DN49610_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_416355 |
| Sequence | AGAAACCAAACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACATTCTTCTTTGCATCAAAAGAGACAACATAAATGAATTAAC ACCCAACATCTTCACTCCTTATTCTTCTTTCTATTAAGACCAACACTTTCAATTCAAACCACCCCTTTTACTTTCTCCCTCGCATAAGATAGATATTAGA AAGATGGCATCAGCAGAAGCAGCTTCTGATGGGGCTGGTCCGAGATATGCACCTGATGATCCTACTCTTCCACAGCCATGGAAGGGTTTGATCGATGGTA GCACCGGTGTGATGTACTACTGGAATCCTGAAACCAATGATACTCAGTATGAAAGACCAGCTCCTTTGGCCCCACCTGTGCCTTCGGGGCCCACACCCGG GGCGTCTACGCCGAGCTTGGCGCCCATACCGGGTGCTCACATGGTACAACCTAGTGGGGTGGTCGCACAGAATGGGCAAGCGCACTTGTCACAACAACTG CAGGGGAGTCATCTCGGCCAACAATATGGGCAACCGATGCTGCAGCACCAGCCTTCTCAGGCTGGCCAATCTGCACAGCAGCAGAATTCTCAGATGTCAC AGTCTGCGCCACAGCCGGGATATCAAGCCAGACCACATTTGATGCATGCTCAAGGACAACAAATGCATTATCAGATGCCGTCGCCGCATTCCCAGCATTA TGGGCAAGGACCACCTCAGGATCATAGCTCGCTTAACATGCAACCACAAGCACCTCAATTCACTCCCCAGAACATGCAGTATATGTCATATCAGCAAAAC ATGATTCAATCTGGGCAACCGAATTCCCTGCCGATGCAGCCGAACATGAATACCTCTGGGCAACCTAACTCCCAGCACATTCAGCATCATATCATGCATG GTCAGCCCCCTTTTGAAAGTCAACAAGATTATAAAGCAGCTTATCCAAAGACAGAGGAAACGGAGTTTAAAAATGGAAGCCAAACTGGACATTCACCATC CCAGTATCAACAAAGAAGTGGTTTGCCTGTTCAAAACAATCAGAGTGTTCCTGCTGATATCACTTCTCATCAATTGCCAAACATAGGTGTTAATGCTGGC CACCCACAACAGTTCAGGGGTTTATCAGGAAACATGCATCAGTCTCCCTCGGCACTGCAGTCGCCGCAGGGTGGTTCTGATTTATTTTACCAACATGGTC CTCGTCCTAACTTTCAAAACCAGATGAGTCCTGGAATGATGCATGGGCATCCACCCAATATCCATCCTGGTGGACAAAAAATGGGACACGAGGACAATTT ACGTGGTCGACCTGGGAATGAATATCACTATAATTCTAGCAAGGAGATGCCGACAATGGGTCGTCATCAGCCAGATATGGCACAAATACCCGTTTCAGGA GGCCAGAAGGATATAATGCCTGGGGGAAGTGGAATTGCCAGGAATTCTATGCAAAACATGTTCACTCCTCCAACGGGACCTCCATCTTTTTCAAGTAATG CTTCGATAAGGCCTCCTTATATTGGATCTTCAGATGCCTCGGGTCTCTCACAAGCTGAACTTTACTGCCAGCAACATGAAGTTACAGCAACAGGAGACAA CATTCCACCCCCTTTTATGTCATTTGATGCCGCTGGGTTTCCTCCGGAGTTATTGAGGGAGATATATTCTGCTGGCTTCTCCAATCCTACGCCAATTCAG GCTCAAACATGGCCCGTTGCACTACAGGGTAGAGACATAGTGGCAATTGCCAAAACAGGCTCTGGGAAAACATTGGGCTATATAATTCCTGCCTTCCTTC TTCTTAAACAGCGGCATAATAATGCCCTAAATGGCCCTACTGTTCTGGTTTTGGCTCCAACACGTGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_170780; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_416355
| Blastp | DEAD-box ATP-dependent RNA helicase 40 from Arabidopsis with 42.45% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 40 from Arabidopsis with 41.88% of identity |
| Eggnog | purine NTP-dependent helicase activity(COG0513) |
| Kegg | Link to kegg annotations (AT3G06480) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425567.1) |
| Pfam | WW domain (PF00397.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |