Ll_transcript_415170

Id TrinityTRINITY_DN49612_c0_g1_i7
Name TranscriptLl_transcript_415170
SequenceACCACGTGGAATCAAAAATTTCTTAGGTCAAATTTGAGGCGCCATGTATGGAATGATGACTATTAGCATCAATTTTCCTCTGACTCAGATACCAAAAATG AAAACATGGATTACCAATTCAAAATCAAATAATAAAAAGTTTTGGCCGTCACACATATTCCACAACCATAAAGGTAAGCACCCAAACACGGTCCTAAACA TTTCGCATTACCCTAATATAGGACTTTTCATTCCTTCGCCGCATGTTCCCCTTTCTTTCAATTTCTCACTCTATTTGAACTAATACCACTGTGCTGTGTT CTGCTCCTGATATAAACCCTATGGCGCTTCGTTTTGAGGTTCACCTTCCAATTATATTTCTACTCAGCCACATTGTCTCTTGTCTTTTTGTTATGCTTGA ATATTTAACTGCTTCGCTGTTCTTTTTTGTTTTCTTTGAATAATTTAATTAATAGGAATCTGTTTATCAATTTTTGATTTTGTTCAAGTGACAAGGGTTT TTGTTTCCCTAAGTGAGTGTTGTGAATGAAAAAATATACATTTTTATTATAAATTTAAATGGAGAGAGTTGTATATTTGTATGACTTTTTTTATATAAAA AAACACTTAATTTTGTAAAAATATATTCCTCCTTTTTTCATTCCAAAAAACCACTTCCTGCGATTTAATTTTTGGAGGGGAGTGAGAAAATGTCTGAAAT TTTGGATGATTCTATATACAATAGCTATGAAGCTCCCATACTGATACGAGTATGGGATATGATATGTGTCCAATATGTGTATACATATATTATTGAAAAT GCAGACATGTTTGAGATACACATATATGCACATTAAAAGTTTATAGAACTGATTAGTGCCCATAAATAAGAATAGCATTGATACCATTTAATCCGTGATC AACGTTATGTAAATGCAACTTCTCTTCTTTCTCTGTACAAATATACATGCTTTGTCTTTTTTCTCTCACTACAAGTCCACTTTTGTACATTGAACGTTAT TTTCCCTTCTACTTAATTGATTATGTTTTATGTTTTTTTCCTCTTTCCCCCTCTTAAGATACGTACCAGAGAGTATATGAAAAGTATTGGATTTATGATT TATTTAATTTTGAAAAAAATAATTTCGATACACTATGGATACGTATCAATGAAGAAGCAGAGAGATACATGAAAGATTGAAGTATCAATGTTTTCATGAT GCAATAGAATAAGAGATAGACATGTGATTGCTGAAAAGCATTGTGTGCGCATGATCTTTTGGCATTTTTTATTTATTTCATAACTGTATTTCAGTTATTC TTTGAACTCCACTCTGTTCCCGTTGTCAGGTTCTTGCCAGGTTCAACCGAGCTCGTGCAGCTCGATTGACACTCCCTCACTTTGTGTGTGAAACGCCTTT ATTTATGCCAGTAGGCACACAAGGGACTATAAAAGGATTGACTAATAGCCAGCTTGAGGATATTGGCTGCCAAATAATTCTTGGAAATACTTATCACTTG GCCCTTCGACCTACTTCGGAGCTTCTTGCGGAAGCTGGCGGTCTTCACAAATTTATGAACTGGCGGAGGGCAATGCTTACAGACTCTGGTGGCTTTCAAA TGGTCTCACTGTTACATCTTGCTGATATCACAGAAAAAGGTGTGACATTTCAGTCACCAGTGGATGGAAAGCCGATGCTTTTAACACCCGAGGAATCAAT TCAGATCCAAAATAGAATTGGGGCAGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATCACTGGTCCAAGAATTGAGGAAGCTATGTATCGA ACACTTAGATGGATTGACAGATGTATAGAAGCTCATGGGAGGCCTCATGATCAGAACTTGTTTGGTATTGTACAGGGTGGTTTGGATCCCGTGTTGAGGG ACATTTGTATCAAAGGCTTGGTGGATCGCAATTTGCCTGGGTAGGTTTGAATTCATTTCAGCATATAAATTATGTATGACTTTACGCTTTGTTCTATTTC CAAAGATTTTATTTTGTGTGCTGTTTTAAGTTTTAACAACTAGATTTGACTGTACTAGCCAATTTGAACATCGGATGGCATTCTTGTGCGTATGATCAGC CTCCAAAACTGACTTGATCAAATTGTTCTTAAATCATAGGACGGATTGGGAGGCTTCTGCTCTGATATTCTCTTTTTTCCATAACTTTTCTTTAGGAGGA TTTCTTATCCTCCTCACTCTGTTATTCTTCTTCTTCATCTTAATAAATCTCTTCTATCCAAAAAGAAGCTATTCATGAATCACCCATGCCTCTGTATTTC CTCTTTAAGTTATAAATTAAAAAAATGGCAGCTCAGGGTACGAGGCTCACACCTTCTTAAACACATTTATTTTGTTATTGGAACATTTTTTCTATTCTAC GTCCAAACTTCAGTTTTTTTATTTTTCTTGGGGACCATGGATTTGATTAATGGTCCAGTTTATGGTAATACATTGGTTTTCTGATCAGATTCTATTATTC ATGGTAAGGGCTAGGCCAATGACAAAAAGAATTATTTTCCTCAAAGCAAACATTGATGAATTCTTCATATGATTAAATTTGAATGTTTTCATCTTCTCCA GGTTTAGTAAAACTCACGGAGGCCCGAT BLAST
Tissuepods
Gene nameLI_gene_170792; 
Additional informationdetails; 

Expression of Ll_transcript_415170

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_415170
BlastpQueuine tRNA-ribosyltransferase catalytic subunit 1 from Danio with 63.69% of identity
BlastxQueuine tRNA-ribosyltransferase catalytic subunit 1 from Danio with 63.54% of identity
EggnogExchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (By similarity)(COG0343)
KeggLink to kegg annotations (393985)
CantataDBLink to cantataDB annotations (CNT0000446)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019416068.1)
PfamQueuine tRNA-ribosyltransferase (PF01702.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;