Id Trinity | TRINITY_DN49615_c1_g2_i6 |
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Name Transcript | Ll_transcript_416711 |
Sequence | AACAACCCTGAACCACCGTTGAAATCCCATTATCTCAATTAGGGTTCCCATTTCCATGGAACCTTGACCTCTTCCTCTTCCTCCGCAAGCCATGGCCACA GAAAACCCTTCCTCTCCCGTTTGGGACCTCTCCTACCTTCTCGACTTCAATCTCGACGATTCCGATCCCAATCCCTCCGTCGATCTTTCCCAACAATTCC ATCTCCCTTCTCCTCCTCACCAGATTCTGGCTCCAGATAACGATAGGGTTCGAAAACGTGACGCTAGGCTCACGTGCCCTAATTTTCTCGCTGGTCACGT GCCTTGTGCTTGCCCTGAGCTCGATGCTATGCTTGAGGATCAAGGATTGCCTCAGAAGAAGAGGGTTCGGACCGCACGTGCTGTGGTTTTGCGGTGCCAG GTTCCCACGTGCGAGGCTGATATCTCTGAACTCAAGGGCTATCACAGGAGGCATAGGGTTTGTCTGCGTTGCGCGAATGCCGCTACCGTTCTTCTTCGTG GGGAGGCCAATAGATACTGTCAGCAGTGTGGGAAGTTTCACATACTACTGGATTTTGATGAAGGTAAACGCAGCTGTAGAAGAAAATTAGAGCGCCATAA CAAACGAAGGCGCAGAAAGCCTGGAGATTCTGAAGCTGCTGGCGGTCATGAACTTCAACATGTCACAGAGAATGAGGATTTCAGTTATGACTGGGAAGCA GGAAAAGATTGTTCAAATTCGAGCGGTGAGATAAATGAAAAAGAAGCATCACTGGATCATGAAGATGAGCCACTTGCTGTTCTGTGCTCAGCTCCCGATG CCCAGAAGATTAATAGCGATGATCCATCTCTTGTTGCTGGTGGTGAAACACAAGTGAATAGTAAGGGAAAAGATGTTCCTGGCATTTCTAATTCTCCTCC ATATCATGGCAATAAGAGTGCTTATTCATCTAGGTGCCAAACAGGTCGGATATCATTTAAACTTTATGATTGGAATCCTGCAGAATTTCCTAGAAGGCTG CGGCACCAAATTTTCCAATGGTTGGAGAGTATGCCTTTAGAGCTGGAGGGATATATCCGCCCTGGATGTACGATCCTCACAATTTTTATTTCAATGCCAA AAACTATGTGGATAAACATACTTGAAGACCCTCTGCACTATGTGTGTGATCTTGTTGCTCCAAGGAAGATGCTATCTGGAAGAGGTAGTGCACTAGTTCA TTTGGATGACATGATCTTCCGTGTTATGAAAGATGGAACTTCTGTGATGAAAGTTGAGGTAAACATGCAGGCACCAAGGCTTCACTATGTTCACCCCACA TGCTTCGAGGCTGGCAAACCTATGGAGTTTGTTGCTTGTGGAAGTAACTTGCTGCAGCCTAAGTTTCGGTGTGAAATTGTCACCTCTTCTAAAATATCAT TTGAAATAGTTTCTTACTGCATATACTGACACACTAGACTTAAGTTACATATGTATGTTTGTCTGTGTTTGTGCATTATATACATTTTAGCAATGTTGAG GACCTAAAGTTTGGTTAAGCTCCCATAAGCAAAAGGAGAGAGGGAAATGTGAAATGTCATGGCTAAATAGAGGGTTTGAAGCATGCTTAGATGCAATTCT TGTCGAATCCTGCATAAACAGGAATGTAATGCAATGCTTTACAGATATATCTTATTTTTCTCCATTAGATTGTTTGTGATAGACTGGGCCTTATCTTGAA ATTGATGCACTGTCTTGGATTATCTGCTACTGTGACTGTGGCACTGTTCATATATGCTCATCTTCTAAATGTATAGTCTTTGCACTGCTAGTCCATATTC TGGTTCAGTTATCATTGATCTTCTGACTGTAATGCGATTCTCATCAACTCATCAACTCATCATGGCAGGCTTCTTGTTTCTTTTTCTGGAAAGTATCAGA ACTATGAGTATTGTGTTCAATGTCCCCATAACTGGACTGGAGATAAT BLAST |
Tissue | pods |
Gene name | LI_gene_170805; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_416711
Blastp | Squamosa promoter-binding-like protein 7 from Arabidopsis with 53.56% of identity |
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Blastx | Squamosa promoter-binding-like protein 7 from Arabidopsis with 52.83% of identity |
Eggnog | Squamosa promoter-binding-like protein(ENOG4111YFE) |
Kegg | Link to kegg annotations (AT5G18830) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425953.1) |
Pfam | SBP domain (PF03110.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |