| Id Trinity | TRINITY_DN49615_c1_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_416719 |
| Sequence | GTAAAAACTAAACTACCCCGCCGTACTTCCCTTCCTTCAACAACCACTTTTCTGAATTCCCAATCTTCTCAATCAATTTCATTTCATGGAACCCTCATCT CAATCTGAATCTCAATCTCATCCACCACAATCCATGGATTCCCCTCTCTGGGATCTCACTGAACTCCTCAACTTCAACCTCGACGACATTCAAATCTCTC CCTCCGTTGACCACCACGATCCCCTCCTTCCTCCGTCGCCGGATATTCTCAAAATTCGCAAGCGAGACCCGAGGCTCACGTGCTCCAATTTCCTCGCCGG TCACGTGCCTTGCGCGTGCCCCGAGCTCGATGCTAAGCTCGATGATGAAGGTTTACCTGGTAAGAAACGTGTCAGAACCGCACGTGCTTCCGTTGGGATC GTACGGTGTCAGGTTCCGACGTGTGAGGTTGATATTTCGGAGCTTAAGGGTTATCATAAGAGGCATAGGGTTTGTTTGAGTTGTGCAAGTGCTGCTACTG TTCTCCTTCATGGGGATGAGCCTAATAGATATTGTCAACAGTGTGGAAAGTTTCACATATTATCGGATTTTGATGAAGGTAAACGCAGCTGTAGAAGAAA ATTAGAGCGCCATAACAAACGAAGGCGAAGAAAGCCTACAGATTCTGAAGTTGCTGCTGGTCATGAACTTGAACATGCCACACAGAATGAGGATTTTAGT TACGACGGGGAAGCAGGGAAAGATTGTTCAAATTCTAGTGGTGAGATAAATGAGAAAGAAGTGTCACCAGATCATGAAGATGAACCACTTGCTATTCTGC GCTCAGCTCCTGATACCAAGAATGTTAATAGTGATGATGTTCCATCTCATGTTGCTTCCAGTGAAACACAAGTGAATAGTGGGAAAGATGTTTCCAACAT TTTTAATACACCTTCATATTGTGACAATAAGAGTGCTTATTCATCTATGTGCCAAACAGCTCGGATATCTTTTAAGCTTTATGATTGGAATCCTGCAGAA TTTCCTAGAAGGCTACGACACCAAGTATTTTAAATCACTGTTATTACCACCGTTAAGTATTTAAATAGTGGCTAGATAATCTGCCTTCTGGATGTCCAGA ACTGATTAACAAGTAGTCAAATGCACTTGCAGATTTTCCAATGGTTGGAGAGTATGCCTTTAGAGCTGGAGGGATATATCCGCCCTGGATGTACGATCCT CACAATTTTTATTTCAATGCCAAAAACTATGTGGATAAACATACTTGAAGACCCTCTGCACTATGTGTGTGATCTTGTTGCTCCAAGGAAGATGCTATCT GGAAGAGGTAGTGCACTAGTTCATTTGGATGACATGATCTTCCGTGTTATGAAAGATGGAACTTCTGTGATGAAAGTTGAGGTAAACATGCAGGCACCAA GGCTTCACTATGTTCATCCCACATACTTTGAGGCTGGAAAACCTATGGAGTTTGTTGCTTGTGGAAGCAACTTGCTGCAGTCAAAGTTTCGGTGTGAAAT TATCACCTCTTCTAAATGCTCATTTGATGTAGTTGCTTACTGCATATTTTGACACAATAGACTTAAGTGACATAAGTACATTTGTCTGCATTTGTTCATT ATATACATTTTTAGCAATGTTGACAACCTAAAGTTTGGTTAAGCTTTCATAAGCAAAAGGAGAGAGAGAGATGTGGAATGTTATGGCTAAGTAGAGGGAT TGGAGCATGCTTAGATGCAATTATTGTTGAAGCCTGCATAAACAGGAATGTATTATTTTTGAAAAAATCTCAGGCTTCACATGTAATTGGATGTGGAAGA AGATGTAATGCTGGACAGATAAATCTTGTTTTTCTGCATACCGTTCATATATGGTCAATTTTGCATTGCTAGTCCATATTTAGGTTCAGTTGTCATTGTA CTCTTCTTACTGTAATGTGATTCTCGTCAAATCATCATGGCAGGCTTCTTGTATCTTTTTCTGGGAAGTATCAGAAGTTTGACTCTTGTGTTCGATCTGC CCATAACTGGACTGGAGATAATGTTTCTTGTGCTTTCGACAATCAGTTATACAAGATACATATTCCTCACACAGAGGAAAGTCTCTTTGGGCCAGCATTT ATTGAGGTAAGCATTGATTGGTGGTTTTGTTTCCTTAACAATGCATTGACTTGGATGTTATATTTGCTTACTTCTTTGCCTTTTAGCTTCTACATTGTGA ACTCCTGGTTTTTGGCCACAATTACTGCTGGACCTGTTGAATGTGAATTCTTGTTTTTCAGCTTTAGTAACTTGTGATGCATTATTCACTGTTATGAGTC AAGTCTCCCAAAAGCTTAAGTTGTTAAGTGAAGTCTATTAGATGGTTTTATCTCCAAAATGGTCGCTTACACAAGGGACCTTTGGCCTTGAAGTTTGGAC AATGAACAGGCTCAGCTACCTTATGCTAAAATTCAACTTTTATTTTGAAGAACGGGGGTGCATGCCGGCTGGGATTGAATTCATGACTCCTTGGTTATAG AGGTTTGATACCATGTCAGAAGCTGACTGTCATAAAAGCTCCAATGTTCTCATTATGGGTTTTATATACATGACATTTACAATTAAAATATGGCATTAAA TATGGAATTAAATCAAATAAAATATTCTAAAATATATTATTAATCAATAGTCGATGATAATAATACAAGTATAAAGAGTATACCGAAAATATCTACTAAG TATACCTATAACATACCAGTATTTTGACTGGGCAACATACTACATACCCGTACTAAAGAGAACCACGTATCAGGTTACTATGTGCCAAACTATTGTATCA TGCTCTTAAAAAATCACTCCCTGGTACTGTAATCAGCTCCATTACCTTCTTGGTTTTTCTATTTGACTGATTCTTATATGAAGTACCTTTAATTTATGCA AGGATGCTCAGAGTAATAGAATTTGGATCTTAAAGTCCAGCACTAGATTGTACAATTGCTGTATTAATCAGACCATATATATGGATATCAGATTTAGATA AATTGACAGAACCCTTTTATGCAGTAAGATATTGGTAGTTGATGCTTTTAGAAATATGATTAAGTTTCAGTTTTAAATGGTTTACAGAAATATTGAGTAC ATTTTTTACATTGTTGTTCTTATGCCCTTTCATATTTCTCTCTGCTGTTTTTAACATATATATTTTCTCTTTCTGTAGGTGGAGAATGAGTCTGGTTTAT CAAACTTTATTCCTGTACTCATTGGTGATAAAGAAATTTGCATTGAAATGAAGAGATTGGAGCAAAAGTTAGATGTGTCTCTCCTTTCTGAACAATTCCA GTCTGCGTCTGTTGGTTCTGTCTGTAGCTCATGTCAGGCTTTTGCACTTAGACATGCATCATCATCATCAGACTTACTTGTAGATATAGCATGGTTGCTT AAGGACCCCACTTCAGAAAATTTTGATCGAGTGATGACTGCTTCACAAATTCAAAGATATCGTTATTTGTTAGATTTTCTAATATGCAATGATTCCACAA TCATTTTAGGAAAAATATTACCGAATTTAACGATCTTGACAGAAAGCATGAAATCAAATGTTGTGACTAATAGGATGAGTGATATCGACATGACAGAACT GCTGAAATGCATGCATAATGCTAGAGATGTCATTTTTCGGAAACTTCACAAAGGTGGGGGTATAATTGTGGACTCTGAAATGGAAGGCTTTAAAGTTGCT CAGAGCTGCTTCCAAGATAACATGCCATCAGTTGCAATTAACAGTCAGGGTATCATGTCAATAGCAGATACATGGTTTGGAGTATCAAGAAGTTCAACTT CTAATGACCGAAATGAAAGGGTAGCACTTTTGAAGAGGGAAATTATAATGAACATGGAAGAGTTGCCTAAATCGTCTTGCCATCGATATCTTCCAAGGGC ATTCTCGATCTCTCAACCGGCTATGTTTGTGATTGCTTCAGTTGCTGTTTGTTTTGGGTTATGTGTAGCTGTCCTTCATCATGGGAGGGTTAGTGAGTTT GCATTATCCATTAGAAGGTGCTTGTTTAACAATTCCTAGCTGTTTCAAATTTTGAACTTATTTTGTAGTTGGTATATATATTTGTTGTAACAGTAAATAA AGAGATGCTATTAGGATGAGTATTAATTATTACATTAGAAGGCTAAGGTATGATTAAAAATCTGGTATGATTCTTGCTGTTGCAGCAGCTTAATACAAAA CATGCTAATTTTCCACTTTGTAGTTTAAATTGAGGAATCAATTGATCATTTGTTTCTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_170805; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_416719
| Blastp | Squamosa promoter-binding-like protein 7 from Arabidopsis with 50.93% of identity |
|---|---|
| Blastx | Squamosa promoter-binding-like protein 7 from Arabidopsis with 52.72% of identity |
| Eggnog | Squamosa promoter-binding-like protein(ENOG4111YFE) |
| Kegg | Link to kegg annotations (AT5G18830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419596.1) |
| Pfam | SBP domain (PF03110.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |