Ll_transcript_414692

• Id Trinity: TRINITY_DN49626_c1_g2_i1
• Name Transcript: Ll_transcript_414692
• Sequence: CAAAGGTAGGGTTGACCAAATACTGTGTCAAATCTAACACAACATGAGTTAAGGTTGTAAGTAACTCACATATTATTTCTTATATAAGCATTCACTTCAC CTCCTATGTTTTCTTTCTCATTCCATCCTTTTCTTTTTCTCTCTCTCACACAAATGGAGTACTCAGATTTATAGACATCATTAAGCTTCGAATCTCTGTG GTTGCAGCCAATTTGGACATGTTGGAAAATGATTGGAAACAACAAGATGTGAGATTGAACTAGTGGAGAGATCTTTCAGTTTGTAACTATTAAGTTCCCC TTTTAAGAGATTTGATGAGTAAATTATCTACAAATGGAGTATTGGAATATGCAGCTTTATTTGGAACTGAAGGGGGTGATGAATTTATAGCTTATGATTT TTTAATTATATGTTAGAAAGAGAAATTTTTTAACTGGGCTCCACTTGAATCTAAAGATTAACCTAAAGTGAAGAATCAATTGTTCTTGAGAGTTGAGATT ACTGTTCAGGTGTTGACTAAATTGAAGCCTTAGCTTTTACTTGCTAATGGGCTATATATAGCCATAGAAAGTTGATTATTTTTCTAGAGACATTTTGATG TCAACAATTTGATACTAGTAATCATTCTTAATTACAAGTGGTGTACTGTTTTTGTGATATTTCTGTTTGCATGAGCAGTTGAATTGTATATTTGATCATA AATATATTTTCTCACACATATTCATTCAGATCCTTATAGTTTTAGCTTCTAGTTGTATCTTTAGTTAATAATCTAATGCAATGTGGGGTTTTGTTTCATT GGTTGTTATAAAATATTTTATGTAAATCACCGGTTCTTTACATTTTTACCTTTGATTGACAAGGATCTTGATTCCTCAGATTGAGTTTCAATTGAGGAAA TGGATCCGAAAGGGAGCTTGTACGATAACAATTGGGCAAGGACCTCTTCCTTGACCTCTCGTGGGAATGGATTACAGACAAATTTGTCCTCACATCCTCC CTCTTTCTATGGTGCCAAGAATGAAGCACCTTTCAAACAATTCAATCAAATCTCTCCTACCCAAGGTTTACTTCCGGGTGAATCTAACAAAGATATTAAG ATCCTTGATCAAGAAAATTTTCCAATTAGTGAGTCCTCACAAACCACTAAACTTCAAGATTGGGATCCTAGTGTCATGTTGAATAACCTTTCCTTCATGG AAGAAAAGATTCATCAGCTCCAGGATCTCGTGCATTTGATTGTTAATAAAAGGTGCCAACCTTTTGGACGTCCTGATGAACTTGTGACTCAGGAACAGCA ACTCGTCACAGCTGATCTCACATCAATTATTGTTCAATTGATCTCTACTGCAGGTAGTCTTCTCCCTTCTGTAAGGCACACCCTTACAAACATAGGTCCA TCGGTTGGACAGCTCAGCCAGCTTCGTGGAAATACATTTCCTTTTGGGTCAGGCCCTAGTAGTGGTATTCGGCCACAAAATAATGGCGGAGATAAAGTTT TCGATCAGTTCACTCAGAATGGTATACCTAAAAATTGTGAAGTGGAGCAAAACTGCCATTTTGAAGAACATGAAACAAAAGACGAAGACGATGTGGAAGA CGGAGAAAATCTTCCACCCGGTTCCTATGAGATTCTACAATTAGAAAAAGAAGAAATCCTTGCACCTCACACACATTTCTGTACAATATGCGGGAAGGGA TTCAAGAGGGACGCAAATCTCCGAATGCACATGCGAGGCCATGGTGACGAGTACAAAACTCCAGCAGCTCTTGCAAAACCACATAAAGAATCTGGTTCAG AACCAAAGCTTATCAAGAGGTATTCCTGCCCCTATGCTGGCTGCAAGCGCAACAAGGATCACAAGAAATTCCAGCCTCTGAAGACTATTTTATGTGTCAA AAATCACTACAAAAGAACACACTGTGACAAGAGTTACATTTGCAGCAGATGCAACACCAAGAGGTTTTCAGTCTTGGCTGACCTTAAAACTCATGAGAAA CACTGTGGTAAGGATAAGTGGCTTTGTTCATGTGGCACGACATTTTCAAGGAAGGACAAGCTTTTTGGCCACATGGCTCTTTTCCAAGGTCACACACCCG CTATTCCTTTCGACGACACTAAAGGAGGACCGGGTGGAGCACTTGATCTCGACATCAAAGAAAACAACAGTAAGGTGGGAAGTATGAACTTCTGTTTTGG ATCAAATTCTTCAAGTGAAAATGGAGTTCAAAACATGGACGTGAAAGGTAATATTGACGATCCTACCAATTATTTCTCGCCATTGAACTTCGAAGGCTGT AATTTTGGTGGGTTTAATGAATTCTCTCAACCTGCATTTGAAGATTCAGAAGGTTCATTCTCCTTTCTCATGTCCGGATCTTTCAATTATGCTCCTAAAA TTGCAGGCGAAACAAATTCGGAGAATCTGTAGTGACAGTTTGTAGTGATGCTCAGATGATATCTATGTTCTTTCTTTTTTCTCTCGTGAAGGAATAAACA TTTTGTTTCAGTTTAGTTGGTATTGCATGTTATATCTTGTACTTGCCATTTCTTAAGATAGGAAGATTATTCCTCTTGAAGCACTTGTTCTTCAGCCATA GACCATTCAATGTAGTTATAAACATTATACAATATTCACCTAAGCACTGTAGCAACACTCTTGGGTTTGATTCTTACTATTACTTTATCCATTCCAATAC CATTGTCCTATCTCCCTCAAGGAGTATTGTAAAGATGTCTGCACTAACAATGTATGAGTTTTATATACTATCATTATATTATCTATCATTCATGTTTAAT CATTATTGACTCTTCAAAAAAATCTAAATAAAATGTGGATGATATAA
• Tissue: pods
• Gene name: LI_gene_170893;
• Additional information: details;

Expression of Ll_transcript_414692

FPKM

• PAB: 2.3
• PNAB: 1.7
• PS1: 2.8
• PS2: 0
• PS3: 0.8
• PW1: 1.7
• PW2: 1.1
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_414692

• Blastp: Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 from Arabidopsis with 56.54% of identity
• Blastx: Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 from Arabidopsis with 56.54% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT1G34370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441972.1)
• Pfam: C2H2-type zinc finger (PF13912.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;