Ll_transcript_414702

• Id Trinity: TRINITY_DN49626_c1_g2_i3
• Name Transcript: Ll_transcript_414702
• Sequence: CAAAGGTAGGGTTGACCAAATACTGTGTCAAATCTAACACAACATGAGTTAAGGTTGTAAGTAACTCACATATTATTTCTTATATAAGCATTCACTTCAC CTCCTATGTTTTCTTTCTCATTCCATCCTTTTCTTTTTCTCTCTCTCACACAAATGGAGTACTCAGATTTATAGACATCATTAAGCTTCGAATCTCTGTG GGTAGTCTTCTCCCTTCTGTAAGGCACACCCTTACAAACATAGGTCCATCGGTTGGACAGCTCAGCCAGCTTCGTGGAAATACATTTCCTTTTGGGTCAG GCCCTAGTAGTGGTATTCGGCCACAAAATAATGGCGGAGATAAAGTTTTCGATCAGTTCACTCAGAATGGTATACCTAAAAATTGTGAAGTGGAGCAAAA CTGCCATTTTGAAGAACATGAAACAAAAGACGAAGACGATGTGGAAGACGGAGAAAATCTTCCACCCGGTTCCTATGAGATTCTACAATTAGAAAAAGAA GAAATCCTTGCACCTCACACACATTTCTGTACAATATGCGGGAAGGGATTCAAGAGGGACGCAAATCTCCGAATGCACATGCGAGGCCATGGTGACGAGT ACAAAACTCCAGCAGCTCTTGCAAAACCACATAAAGAATCTGGTTCAGAACCAAAGCTTATCAAGAGGTATTCCTGCCCCTATGCTGGCTGCAAGCGCAA CAAGGATCACAAGAAATTCCAGCCTCTGAAGACTATTTTATGTGTCAAAAATCACTACAAAAGAACACACTGTGACAAGAGTTACATTTGCAGCAGATGC AACACCAAGAGGTTTTCAGTCTTGGCTGACCTTAAAACTCATGAGAAACACTGTGGTAAGGATAAGTGGCTTTGTTCATGTGGCACGACATTTTCAAGGA AGGACAAGCTTTTTGGCCACATGGCTCTTTTCCAAGGTCACACACCCGCTATTCCTTTCGACGACACTAAAGGAGGACCGGGTGGAGCACTTGATCTCGA CATCAAAGAAAACAACAGTAAGGTGGGAAGTATGAACTTCTGTTTTGGATCAAATTCTTCAAGTGAAAATGGAGTTCAAAACATGGACGTGAAAGGTAAT ATTGACGATCCTACCAATTATTTCTCGCCATTGAACTTCGAAGGCTGTAATTTTGGTGGGTTTAATGAATTCTCTCAACCTGCATTTGAAGATTCAGAAG GTTCATTCTCCTTTCTCATGTCCGGATCTTTCAATTATGCTCCTAAAATTGCAGGCGAAACAAATTCGGAGAATCTGTAGTGACAGTTTGTAGTGATGCT CAGATGATATCTATGTTCTTTCTTTTTTCTCTCGTGAAGGAATAAACATTTTGTTTCAGTTTAGTTGGTATTGCATGTTATATCTTGTACTTGCCATTTC TTAAGATAGGAAGATTATTCCTCTTGAAGCACTTGTTCTTCAGCCATAGACCATTCAATGTAGTTATAAACATTATACAATATTCACCTAAGCACTGTAG CAACACTCTTGGGTTTGATTCTTACTATTACTTTATCCATTCCAATACCATTGTCCTATCTCCCTCAAGGAGTATTGTAAAGATGTCTGCACTAACAATG TATGAGTTTTATATACTATCATTATATTATCTATCATTCATGTTTAATCATTATTGACTCTTCAAAAAAATCTAAATAAAATGTGGATGATATAA
• Tissue: pods
• Gene name: LI_gene_170893;
• Additional information: details;

Expression of Ll_transcript_414702

FPKM

• PAB: 5.5
• PNAB: 2
• PS1: 13.2
• PS2: 1.4
• PS3: 2.6
• PW1: 5.2
• PW2: 4.7
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_414702

• Blastp: Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 from Arabidopsis with 63.6% of identity
• Blastx: Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 from Arabidopsis with 61.8% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT1G34370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441972.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;