Ll_transcript_414708

• Id Trinity: TRINITY_DN49626_c1_g2_i4
• Name Transcript: Ll_transcript_414708
• Sequence: CAAAGGTAGGGTTGACCAAATACTGTGTCAAATCTAACACAACATGAGTTAAGGTTGTAAGTAACTCACATATTATTTCTTATATAAGCATTCACTTCAC CTCCTATGTTTTCTTTCTCATTCCATCCTTTTCTTTTTCTCTCTCTCACACAAATGGAGTACTCAGATTTATAGACATCATTAAGCTTCGAATCTCTGTG GGATCTTGATTCCTCAGATTGAGTTTCAATTGAGGAAATGGATCCGAAAGGGAGCTTGTACGATAACAATTGGGCAAGGACCTCTTCCTTGACCTCTCGT GGGAATGGATTACAGACAAATTTGTCCTCACATCCTCCCTCTTTCTATGGTGCCAAGAATGAAGCACCTTTCAAACAATTCAATCAAATCTCTCCTACCC AAGGTTTACTTCCGGGTGAATCTAACAAAGATATTAAGATCCTTGATCAAGAAAATTTTCCAATTAGTGAGTCCTCACAAACCACTAAACTTCAAGATTG GGATCCTAGTGTCATGTTGAATAACCTTTCCTTCATGGAAGAAAAGATTCATCAGCTCCAGGATCTCGTGCATTTGATTGTTAATAAAAGGTGCCAACCT TTTGGACGTCCTGATGAACTTGTGACTCAGGAACAGCAACTCGTCACAGCTGATCTCACATCAATTATTGTTCAATTGATCTCTACTGCAGGTAGTCTTC TCCCTTCTGTAAGGCACACCCTTACAAACATAGGTCCATCGGTTGGACAGCTCAGCCAGCTTCGTGGAAATACATTTCCTTTTGGGTCAGGCCCTAGTAG TGGTATTCGGCCACAAAATAATGGCGGAGATAAAGTTTTCGATCAGTTCACTCAGAATGGTATACCTAAAAATTGTGAAGTGGAGCAAAACTGCCATTTT GAAGAACATGAAACAAAAGACGAAGACGATGTGGAAGACGGAGAAAATCTTCCACCCGGTTCCTATGAGATTCTACAATTAGAAAAAGAAGAAATCCTTG CACCTCACACACATTTCTGTACAATATGCGGGAAGGGATTCAAGAGGGACGCAAATCTCCGAATGCACATGCGAGGCCATGGTGACGAGTACAAAACTCC AGCAGCTCTTGCAAAACCACATAAAGAATCTGGTTCAGAACCAAAGCTTATCAAGAGGTATTCCTGCCCCTATGCTGGCTGCAAGCGCAACAAGGATCAC AAGAAATTCCAGCCTCTGAAGACTATTTTATGTGTCAAAAATCACTACAAAAGAACACACTGTGACAAGAGTTACATTTGCAGCAGATGCAACACCAAGA GGTTTTCAGTCTTGGCTGACCTTAAAACTCATGAGAAACACTGTGGTAAGGATAAGTGGCTTTGTTCATGTGGCACGACATTTTCAAGGAAGGACAAGCT TTTTGGCCACATGGCTCTTTTCCAAGGTCACACACCCGCTATTCCTTTCGACGACACTAAAGGAGGACCGGGTGGAGCACTTGATCTCGACATCAAAGAA AACAACAGTAAGGTGGGAAGTATGAACTTCTGTTTTGGATCAAATTCTTCAAGTGAAAATGGAGTTCAAAACATGGACGTGAAAGGTAATATTGACGATC CTACCAATTATTTCTCGCCATTGAACTTCGAAGGCTGTAATTTTGGTGGGTTTAATGAATTCTCTCAACCTGCATTTGAAGATTCAGAAGGTTCATTCTC CTTTCTCATGTCCGGATCTTTCAATTATGCTCCTAAAATTGCAGGCGAAACAAATTCGGAGAATCTGTAGTGACAGTTTGTAGTGATGCTCAGATGATAT CTATGTTCTTTCTTTTTTCTCTCGTGAAGGAATAAACATTTTGTTTCAGTTTAGTTGGTATTGCATGTTATATCTTGTACTTGCCATTTCTTAAGATAGG AAGATTATTCCTCTTGAAGCACTTGTTCTTCAGCCATAGACCATTCAATGTAGTTATAAACATTATACAATATTCACCTAAGCACTGTAGCAACACTCTT GGGTTTGATTCTTACTATTACTTTATCCATTCCAATACCATTGTCCTATCTCCCTCAAGGAGTATTGTAAAGATGTCTGCACTAACAATGTATGAGTTTT ATATACTATCATTATATTATCTATCATTCATGTTTAATCATTATTGACTCTTCAAAAAAATCTAAATAAAATGTGGATGATATAA
• Tissue: pods
• Gene name: LI_gene_170893;
• Additional information: details;

Expression of Ll_transcript_414708

FPKM

• PAB: 3.1
• PNAB: 4.8
• PS1: 14.3
• PS2: 4.2
• PS3: 6.7
• PW1: 8.8
• PW2: 5.3
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_414708

• Blastp: Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 from Arabidopsis with 56.54% of identity
• Blastx: Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 from Arabidopsis with 56.54% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT1G34370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441972.1)
• Pfam: C2H2-type zinc finger (PF13912.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;