Ll_transcript_415454

• Id Trinity: TRINITY_DN49627_c6_g1_i1
• Name Transcript: Ll_transcript_415454
• Sequence: CCCCACTCAACGACTCTATCATCATTTTTCTCTTTACCTTTCACACTCTCTATCTGACACAAGTCTTCACAAATTACAAGTTTACAACACAAAACACAAG TACTTAGGTACATCTACATTTTTCTGTTTCATCACTCTCATTTCATTTCTAAGTTCTATCACAAAAATAGGAACAACAACAACAAAAACATTAACACAAA CCTTCATGGCTGATGCTACAAAATATGAACTCATTGGTGTGGGTAACAACAACAACAACCACCTAGTCACAGACCTAAAAAACATCTTCTCCATTCTCAA AGCAAGAAAAACAGTTGCTTTTGCATATGTTTTCACACTTGTCTTTGTTTCTGTTACTGTTTTCTTAGCCTTTTCACCTTCTCAAAATGCTTCATCTCCT TGGTTCACAAATATATTCTCATCTTCTTCTACAACTACAACAACAACACCTGATTCATATAAATCTCAACTTTCTCCTTTCTTCTCTTTCCTTTTTCCAA ACACTACAAATTCTTCTAGATCTACCAATGCTACTTCTCAATCTCGTAATCCCAACACAAATGAGGAAACTTTCAAAGCACCCTCTTTGGAAAACATGAC TAAAAGCTTAGTAAATTCATCACAAGGTGCAGTTCCAGTTTCAGTTCCAAGAACAAACCAAACCACAGTTTCCACCACAAAAAACTCAACTTTGCAAGGA AATTCAACTTCCCTTGTAAACAAGGAAGTGGGGGTTAAAAATCAAACTTTGAAGCCTGATGAAGCTAAATCTGTGAAGAAAAATCAATCTTCAAATGCTA CTGTTCCTTCTGCAACCAATGTTTCAAGTTCAAATGCTTCTTCTGTGAAGGGTGTTGTTTCAAATAATTATACAGCTTCTTTGGCGAAGAAAAAAAAGAA TGGGAAAAATGGAGCAAGAGAAAAGGATGAATATTTGGAGTCTCTGATAAAGTGTGATTTTTTTGATGGAGAGTGGGTGAAGGATGATTCATACCCACTT TATGAATCAGATTCTTGCACTGATCTGATTGATGAACAGTTCAATTGTATTAGAAATGGAAGGCTTGATAAGAATTTTCAGAAATATAAGTGGAAGCCCA AGGGATGCATTCTCCCAAGGCTCGATGGCCATCGAATGCTGGATTTGTTGAGGGGAAAGAGACTGGTTTTCGTTGGCGATTCTCTCAACAGGAACATGTG GGAATCTCTGATTTGCATACTAAGAAAAGCTGCGAAACATAAAAGCAGAGTTTATGAAGTAAATGGAAGGGTTCATTTCAGAGGCGAAGCTTCTTATTCA TTCATATTCAAAGATTATAACTTCACCGTGGAGCTTTTCGTGTCTCCATTCTTAGTTCAAGAGTGGGAGATGCCTGATAAGAATGGAACAAAGAAGGAAA CACTTCGTCTCGATTTAGTTGGTAGATCTTCAGATCAATATAAAGATGCAGATATTATAGTTTTCAACACTGGTCATTGGTGGACTCATGATAAAACTGC TAAAGGGGAGGACTATTACCAAGAAGGTAGCCATATCTATCATGAACTAAATGTTCTCGAGGCATTCCGAAAAGCTATTACAACATGGAGCAGGTGGGTT GATGCCAATGTAAACCCATCCAAATCTATGGTCTTCTTCAGAGGCTATTCTGCTTCCCATTTCAGTGGCGGGCAATGGAATTCGGGTGGAGCTTGTGACA GTGAAACTGAGCCCATCGATAATGAGAAGTACCTAAATCAATACCCGCCTAAGATGGGGGTTTTGGAAAATGTGCTGAAGTTTATGAAAACCGATGTCAC GTACTTGAATATCACCAGAATGACAGATTTTCGGAAGGACGGTCATCCCTCGATATACAGGAAGCAAAACCTATCACCCGAGGAGAGGAAATCACCACTG CGATACCAAGACTGCAGTCACTGGTGCCTTCCAGGTGTTCCTGATGCGTGGAATGAGATTCTATATGCTGAAATTTTAACGAGACAATATCAGAATCAGC ATCAGCAGAAGCGAGGCTAGGTAATATAAACTACCATGCTTCGGATAAGGCTTCTCTAAAGTGAGCATGAGCATACACGTGTTAAAAACGAAATCCGCAT CTACCTTTGATTAGTTAAACTGCATAGAGATATCATTTCACTTTAACTAATCAACGGGCGATGTCTTAAGCTTACTTTTAGAGAAGTTTTTTCCATATAC TTATGTCTCATTTATATTTAATGAGTTAAATTGAAGCATAACAAATGCTATATACCATTTTTGTCCCATCCATTTCAGGATAGGGAAAAAATGATACTAT ACTAAAAATGCCCTTTTATTTTGTTGAAAAAGCTAAGAGAGACAAGATATAATTAAGAGATATAAGTACCTTATAATTATGCAATAAATTTGTTAATATG TATTTGCATAAGTTAGTGAAGAGAGGAGAGAAGTGGTGATTAGTTTGTCTTTGAAAATCATCCCTTCCATGCATCTTCATTTTCTTTCTAGCCTGAAAGG GTGAGTGCTATTGTAAATCTGTAATAGATTAGACTTCAATATAATCAAACATTTAAGATGAACTAATCATGGACCCTTTGGTTAATTTATCTGATTGAAT GTTGATTTAAATCTAGTTATAGGGGAGAGTATTAGACCAGGTGGCCAATTGGAGCAAATGATCTTGCTTATTTTCGGATTCCGGTCTACAAAGACGTAGT TTATTTAGCAAACAAGTCAGACTCAGGCTTTTCAAAATACTTTTTTTACTACCGGATAGGTTTGTACTTTTGAAAAAGCCTACCAGTATGGTCTATTTAT GTAGTATATATACACATATTAAGAGTTTATATTGGGCATTTTTACGGAAGTGGTATAGTTTGACCATGTTTTTACACGTCTAGTGTAACTTTTCGAATAT TTATAAGATTAGTATACTTTTCTGAACGTCGTGTCTGTCATTCACGACTTCTATGAAAGTCGTGGACCAGAAATGCGAGATTCATGTTAATTTCGTGCAC CAGAAATGCGAGATTATAGTTAGTTGGATGTCGTGGATAGTATCCACAAGTTCAAGTTAAAATAATTGTTTATTCGTAATTGTATTTGTATTATT
• Tissue: pods
• Gene name: LI_gene_170912;
• Additional information: details;

Expression of Ll_transcript_415454

FPKM

• PAB: 8
• PNAB: 20
• PS1: 15.2
• PS2: 22.3
• PS3: 30.8
• PW1: 39
• PW2: 50.8
• PW3: 24.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_415454

• Blastp: Protein trichome birefringence from Arabidopsis with 57.84% of identity
• Blastx: Protein trichome birefringence from Arabidopsis with 74.04% of identity
• Eggnog: Pfam:DUF231(ENOG410YC5G)
• Kegg: Link to kegg annotations (AT5G06700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419528.1)
• Pfam: PMR5 N terminal Domain (PF14416.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;