Ll_transcript_416187

• Id Trinity: TRINITY_DN49630_c3_g1_i3
• Name Transcript: Ll_transcript_416187
• Sequence: GAAAAAATGATAATTCAATATAATTATTAATTATATAAAATTTTACCTTTATATATAATTATATATTTATAGATAATAATTATTAATTATGTATTAAATC ACCCGGTCAGACCAGACGGTCTAACCGGTTGAACCTAATACGGGACCTCTTCTAGTTTGACGTCCGGCTCGGGTTTCACAACATTGGTTTCAATCTCAGT ATCAGAGTTATACTCTCACATTTTATGCATTTTTAAGTAATATTTGAATTATTGTTCTTACAATTCCAGGAAGAAGAAGGAAAAGATGAAACTCATTTCC ACATTGCTACCAGTTGTATTTCTCACTCATTGAAGTCTCAGATCATTAACAGATCCTATGATGAAATTGCCATTTGCTTCTATAACACAAGGGAGAAGAA GAATATACAAGACTTAAATGGTGTTGTTGTATTTAATGTTGCCGAAAGAGAGTTTTTGGACAGGCCAAATGCCAGGCTCATTAAAGAATTTGACTCTATT GAGGAAACTTTTTCTAAAAACATTGGAAGCAAGCAAGGCATCGTGTCTGCGACTCGAGAAAATTCCCTCTATAATGCTATCTGGGTAGCACAAGCACTTC TTCGTAAAGGGTCAGCAAAGACAGTAGATAAGCGCATGCTTTTGTTCACAAATGAAGATGATCCTTTTGGGAGTATGAATGGGGCTATAAAATCAGACAT GACAAGAACGACACTGCAGAGAGCTAAAGATGCACAGGATCTTGGCATCTCTATTGAACTTCTTCCCTTGAGTTGCCCTGACGAAGTATTCAATGTTTCT CAATTCTATGCTGATTTGATTGGGCTGGAAGGAGATCATCTTGTTGACTTTATGCCATCAGCAGGAAACAAATTGGAGGATATGAAAGATCAGCTAAGAA AACGCATGTTTACAAAGCGCATAGTCAAAAGGATTAAATTTATGATAGCGAATGGGATATCTATAGATCTGAATTCATATGCCTTAATTCGTCCCACTGT GCCGGGAGCAATCACATGGCTTGATTCTGTTACGAATCGTCCTTTGAAGAGTGAAAGAACTTTCATTTGTGCTGATACTGGTGCCCTGGTGGAAGAATCT TCTAGACGATTTCATCCATATAAAAAGTATTCGTTTTTCTAAGAAGATTGGACTTCGCTAATTATAGCAACCCTACTAAGTAGGCCATCACTTTGCTCTG ACAATAGGAGTTTCTTGGATGTTGATTACATTGGGTTCTATGTTGTGGGAAAATGTTCTCTATAAAAAGCAGGAAGTGAAATGACTTTATTAATTAGGAA ATTCCTTTGAGTGATAATTCTTAGTCCGTTTCATTTTGGCATTATGTTCTTGATAAGGTCTCTAAGAATTTGGATAATTGGAAGGGTGTTTTTTCTGGTT GGTCTACGGTCATATTATTATATTCTGTCCTGCTTGTTTAGTGACACCTTTTATTTCTTTTCCTCAGATAGTACTTGGAGAGAATCATAGGTTGGACAAT TATTCTGGGTTTTCTGTGGTCATGGGTGAGGGTAACAATAGTGTCTTGTTATGGATAGATCTAGTTAGAATTTAGAAAATGTTTTTTTTTATTCTTACAA AAAGAAGCTAATGCTCTTTGGAATGGTTTGTTTGCATTTGTTGATGAAGTAGACTGACTACTCATAGGCAAGATTGGGGTATCAGGCTACAAATCAAACT TATGAGTTTGTTGAAGCCGAGTGCTTTATTGGACACTCACATAAATTTGCTTGCTAACTACATCTGCCTGGGGGAATACCTCGAATGCCCTTATTCTAAT TTTTGAAGTTGTGTTGTTTCCTTTTGTTTTTAGTTATGATGTAACATTTATTTGTGTATATTTTTCAGCCAGAATATTACATTTTCAATGAAGGAACTGA TTGAAATTAAAAGAGTTTCTACTGGACATCTACATCTTTTAGGGTTCAAGCCACTAAATTGTTTGAGAGATTATCACAACCTGAGGCCATCAACTTTCCT TTACCCAAGTGATGAGGGTATGGATGGTAGCATGTGTATCTTCGTTGCCCTCCATAGGTCCATGATACAGCTCAATC
• Tissue: pods
• Gene name: LI_gene_170952;
• Additional information: details;

Expression of Ll_transcript_416187

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416187

• Blastp: ATP-dependent DNA helicase 2 subunit KU70 from Arabidopsis with 68.1% of identity
• Blastx: ATP-dependent DNA helicase 2 subunit KU70 from Arabidopsis with 71.53% of identity
• Eggnog: X-ray repair complementing defective repair in Chinese hamster cells 6(ENOG410XNXU)
• Kegg: Link to kegg annotations (AT1G16970)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441578.1)
• Pfam: Ku70/Ku80 N-terminal alpha/beta domain (PF03731.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;