Ll_transcript_414863

• Id Trinity: TRINITY_DN49637_c1_g1_i5
• Name Transcript: Ll_transcript_414863
• Sequence: CGTCCCTCACAAAAGATCGTGAGTCGTGACTTCCCTCTATTTTCTTTTTTTTTTGTATCTATTTTTTAAGGACAGTTACTTTTTAGAAACTCATCGGTTC TTCTTCTTCTTAACTCTCTCTTTCTCTGTGGCCTTCAAAAACTTGAAATCTCAACCGCGAACCAATCTTTTCGCTTCAGTTCGTTTTCGCCTTCGCCTTT CGCTTATTTTCTCTCTTTCTCAAACCAAACCCTAATACTCGCAATTCCACTTTCTCTCCATTGAAGAAAAGTTTGGCCTTAGAAAAATTCAAACTCCGCT ACTAGTTTCTTCTTGAATGCACGGTAGTGTTGGTTTTTAGGTAGTAGTTTCTGAATTTGGATTATTAAGAGGCATTGTTCTTTGATTTTGATGGGAGAAG AAGTGGTTTGCGTGCAAGCATTAGAAAATGGGAGGAATGGAAACAACGAGGAGGAATCACGAATGGAACTGAAGCGTGATTACAACCAATGCATTGCTGT TACAGTTGATAATAATACTGAGCCTGACCAATCTCCGAATAAGAAACAAGTGAAAGAGGCTTCCAACGATGAAGTTTGCTCCGAGGTTACGAACCCTAAT ACTTCTGCAGCAGAGAATGGGTTAACAACCTTTCATGATATCAGTAGCCAACCAAGTGAGCCGGCGAATATTGTTGAGTGTGGGGAATTGACTTCTACTT GCTTGGAGAACTCAAGTTCTTCTGATGAGACATTGAGTATGGACGACCCGAAAAAGAACAAAAACAGCAATACATCTCAGAATGATAATAAGGACACAAG CAGTGCTGCAGCGATGTCGTGTGTTGTGATGGAAATACCTAAGCATGCTAGTTCTTCTGGGGTTAGAAAGATTACTTTTAAGTTCAGTAAGAAGAAAGAG GACTATGATGAAGAATATTTGGCAAAGGCTGATTTGGATCATAATAATGAGTTGCATGAAAGCTCATGTGGAATGGGACATGCTGGAACTGGAGATATGG ACTTTTATGCTGCTCGCAATATGGAAATGAAAATGTCGAAGAAGGTTGTCCCCAACTACTACCCTACGAATGTTAAAAAACTGTTATCAACTGGTATCCT TGATGGAGCTATAGTTAAATATATGTACAACCCCATGAAGGTTGAGCTACGTGGGATTATTGGTGGTGGTGGATACTTGTGTAGCTGTTCACTGTGCAAT TACTCCAGAGTGCTTAGTGCATATGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGACATCCTAACAATCATATATACCTAGAGAATGGAAAGCCAATAT ACAGCATTATACAGGAAATAAAAATTGCTCCACTCAACATATTAGATGAGGTTATAAAGAATGTAGCCGGTTCATCTGTCAATGAGGAGTGCTTCCAGGC TTGGAAAGAAAGCCTTCTACAAAGCGATGGGAGGGTTAAAACTTATAAAGAGAGTAGCACAAATCATACTGGAATGCCTCATAAACGCACAAGTCAATCT GTAGAAAGTGTGTGCCATTTGTCTTCTTTGCATGTTCCAAGTCATTTTGAGCAGCAAATGTATGTGCCGCAGACTGCTGATGGGTGGAAACATGCAGTGA AGAAAAGCTCCCCAGGCGTACAGCTGAAGAGAAATGTGGATGGCTGCACTAAGAGAAGGGACAATGATTTACACAAGTTACTTTTCATGCCAAATGGACT CCCAGATGGTGCTGATTTGGCTTATTATGTCAAGGGACAGAAATTACTTGGAGGTTACAAACAGGGAAATGGTATAGTCTGTGGTTGTTGTGACTTAGAG ATAAGCCCTTCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGACGTCAACCTTACCGACACATATATACATCCAATGGATTAACACTCCATGATATAG CTCTCTCCTTGGCAAGTGGTCAAAATCTTACCACAGGAGATAGTGATGATATGTGTGCAATATGTGGAGATGGAGGGGACTTGATTCTTTGCAATGGATG TCCTAGGGCTTTTCATGCAGCCTGCTTAGGTTTAGAGTGTGCTCCAGAAAGTTGTTGGCACTGTCTAAACTGTAGAGATAATGTTGGTAATGGAAGAGAA TCTTCTATGGTGAGG
• Tissue: pods
• Gene name: LI_gene_171005;
• Additional information: details;

Expression of Ll_transcript_414863

FPKM

• PAB: 1.6
• PNAB: 0.8
• PS1: 1.6
• PS2: 2.8
• PS3: 1.4
• PW1: 1.7
• PW2: 3.7
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_414863

• Blastp: Increased DNA methylation 1 from Arabidopsis with 34.45% of identity
• Blastx: Increased DNA methylation 1 from Arabidopsis with 34.82% of identity
• Eggnog: PHD(ENOG410Y0W7)
• Kegg: Link to kegg annotations (AT3G14980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428220.1)
• Pfam: TPL-binding domain in jasmonate signalling (PF16135.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;