Ll_transcript_413997

• Id Trinity: TRINITY_DN49638_c0_g1_i3
• Name Transcript: Ll_transcript_413997
• Sequence: GGTTGTTCCCGCCTTACAATATTTTGAAAACTTGATCTCTACAATCACTTATTCATTGAACTTTGAAGTTTGAACTGAGTGAAGAAAGCACCATAGCCAC AATGAGTTCAAATTCCAAAACCGTTGAAGATTCTTCACATTCACGATCAGAAGGAAGATCCACCACCACCACCACCACCACCACTTCACAAGATCTATGG TCAGAAATTATCGCCGATGAATCACAACAACGCTACCATCATCAACCACAGCAACAAATCGATGTCGTTTATCAAAGACGAAAACCTCGCAATAACCATA ACGACGCTAACTCGAAGCAATTTGATCCGAATCCATCGCGACCTATTCGGGTTAGTTTAATAGACCCGAATAAACGAGTGAGTTGGAACCGTGCTCTTTC TACCAGAGGGAGGACAAGTATAGCTGTTGGTGCTTGTATGGTTTACCAGCCTCAGTCAAAAAAGGAAAAAAGAAAAGGGAAACCTGCCCTTCCAAAAGGG AAGTTTGTGAAACCTCCTAATTTTGACAATGAGAGATTATACTTCCAAGAGGTTGATGCTTTTGACTTGATGGAAGAGAGCCCCTCGCCGAAGAAAGCTG GCATGTGGCTTGTTGGCAATTCAGAAGAAGATGCTCAACTACCAACTCTATGCTCTAGATTAGAAAAGTGGTTATACTCCAGACAATTAAACCCCGGCTA CAGTTCCTCCACAACACTATTTAAGATACTAGAGACTCCATCGACGATTTCGGGAACTGGTCATGATGTCAATTTCAGTGCTTCAAACTTGAGAACATTG GAAAGAACTGGAGTAAACAATTCACAATTGGATAAAATCAAAACTGGAGACAATAGAGGTTTTATCGACGAAATTTCTTCTGGGATTGACATAAATTTGC GAATAAAGGAAGAGATACAGTCTGATCAAGATGATGAAGGCCATGAACATATAGAAGCCGCTGTTAAAAAACTGTCTTTGACATTGACTTCATCTTTGGT AGACGATGACCATATCAGTCCATTTGCTGCCTTGTTAGCGATTTGTGGACAGTATGCGCCTTTGATGTTACAAGATGCATTCTCTAGTGATTCAGAAACT GTTGTCAAAATTGGTGAAGGAACATTTGGAGAAGCATTCAAGGTAGGCAAATATGTCTGCAAAATAGTTCCATTTGATGGGGACTTAAGAGTGAATGGAG AAGTTCAAAAGAGATCAGAAGAATTGATGGAGGAGGTGCTTCTTTGCAAAACTCTTAATCAATTGAGAGGAAATATTGGAGACTCTAACAATGTATGCAG AACATTCATAGAATCGATAGAATTTAGAGTATGCCAAGGTCCTTATAGCGGTGCACTACTTGGAGCATGGGAAGATTGGGATGATAAGCATGGTTCAGAA AATGATCACCCAAAAGAGTTCCCAGAGAAACAGTGTTATGTGGTCTTTGTACAAGAACATGGTGGCAAGGATCTTGAAAGTTTTGTACTCCTGAATTTTG ATGAGGCAAGGACTTTACTGGTTCAGGTTACAGCTGGGCTTGCTGTTGCTGAATCTGCCTATGAGTTCGAACACCGAGATCTTCACTGGGGAAATATACT CATCAGTCGAAGTGATTCCGCAAAATTGCAGTTCACTCTTGATGGCAAGGATATTTTTGTTAAAACATATGGATTGTTAGTATCTATTATTGACTTTACC TTGTCAAGAATTAATACAGGTGATAGAATACTTTACTTAGATCTTTCCTCAGATCCTGACCTCTTTAAAGGACCAAAAGGAGACAAACAGTCAGAAACAT ATCGGAGGATGAAGGAGGTAACAGAAGATTGGTGGGAAGGAAGTTTTCCTAGAACAAATGTCTTGTGGTTGCATTACTTGGTAGACATCCTTCTCTTGAA GAAATCATTTGAACGAAGTTCAAAGAATGAAAGAGATCTAAGATCGTTGAAGAAGCGTCTCGACAAGTATAATTCAGCTACGGAAGCAATCAACGATCCG TTCTTCAGTGACTTGATTGTTGAGAATGACAATTGAGGTATGATAACAAAAAGTGACGACCCAATACACGAGGCACGCACTCGGTCAGGTATGAGGAGGG TAGATGTATAACAGCAGATGAAAAGAGAGAGGTGATATACACAAGTAGTGTATTGATTTTGCTTAGTTGGAATGCAAATGTATAGATCTAAATGTGATGA TATAACAATTTATAGTTTCTAAACAGCTGGTATAACTTAATCAACAATGCAGATAAAATGTAAGAATTGATAAGATCAATGTAGTAAGCTTTCTTTGTCA AATGTTAATTCATATATCACTAATCCTGAAAGTGATTAGTTCATTCTCCAAAACATTAGTAGTACCAAAAATCGATTTTTTTTGCTGAGGGGAGTGTTTT TTTCTATAGACC
• Tissue: pods
• Gene name: LI_gene_171006;
• Additional information: details;

Expression of Ll_transcript_413997

FPKM

• PAB: 0.2
• PNAB: 7.5
• PS1: 5.8
• PS2: 2.7
• PS3: 3.9
• PW1: 2.6
• PW2: 1.4
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_413997

• Blastp: Serine/threonine-protein kinase haspin homolog from Arabidopsis with 54.4% of identity
• Blastx: Serine/threonine-protein kinase haspin homolog from Arabidopsis with 54.31% of identity
• Eggnog: germ cell associated 2 (haspin)(COG5072)
• Kegg: Link to kegg annotations (AT1G09450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419864.1)
• Pfam: Haspin like kinase domain (PF12330.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;