Id Trinity | TRINITY_DN49641_c0_g1_i15 |
---|---|
Name Transcript | Ll_transcript_415219 |
Sequence | ATTAGATTCTTTGTTTGCTTGGACTGTTCTTGACAAAGCATATATGAGTGAATGAGTCAATTATGATGTCTGTCAGTGTTCATATAAATTTACCAATTTG GAAGTAAAGCTAATTGAGCTGAGAAAAGATACATCAAAATCTTCTGAACATTACCTTTGAGAGAGAGATGGCTATACCAGACCCAACATCTTTTCCAAAT CTATTTCAGAGGGTTGCTTCAGCACAGTTTAGAAGGCCTCTCCTTCATTTAGTGTCCACTCAAGAAAATAGACATAGATACCTAACTCAATGTGTTCCCC TTCACAAAGCAGCACTGAAAGGTGACTGGAAAGAAGCTAGTAAAATAATAGAACAAGATAATACATTGCTGAAAGCAGCCATAACAAAGGGTTGGGCCAC AGTTCTTCACATAGCAGCAGGAACAAATCATGTTCACTTTGTGGAGGAACTAGTGCGAAAATTGAAACATGAAGATTTAGAGTTGGAAGATGAAAAATCA AACACTGCATTCTGTTTTGCTGCAGCAGTTGGGAATGTTGAAATTGCTAAGATAATGTTGAGAAGGAATGAATCATTGGCACAAATAAGGGGTGGAGAAG GATTAACTCCTCTTCACATGGCTCTTTTACAAGGAAGAAGGGAAATGGCATGGTACCTGTTACCTAAATCTAAAGAAATACTTCAAGAATTAGACTGGAA GGTGTTGTTTCACATTTGTATAAATTCTGAACTCTATGGTAAGCACATTGCATAAAATTCCCTTGAATCATTTGAGTTTAAAAATCAAAGGGTATATACA CATATATATCAGCAAGGGGAGGTAAGAAAATAAGAGTCTAATATCTATGCACCGAATAAGAGTGGGTGATGCACTGACAATGTTTTTCTAAAAAAATCTT GTTCTAATGTAAATAAGTTGGGATGTTTTGCAGATTTAGCCTTGGAAATGCTAAAGGAAAAGAAAATGCTAGCTTTTGCTCCAATTGGAGATACTGGTGA GACAGGTTTGCATGTATTGGCCCGAAAGGCTTCAGTTTGTTGTTGCCAAAGTCTACAATATGGAAAACACCTCTTGCATTTCTGTAAGTGTCTATAACAT TGTTATTATATCGTATATCAGTTGTCAAATCGACCAGGATATTAATATAATAGTATAACGGTTTAATCAATCCTCACTAATTAAATCACATACCGGTAAA ATTAAGTATGCATATAATATATTAATATTAATGTTGAAAAATCAATAATATTTTATATTTTCATTAAAAAATAATTTTAAATAAAAATCTGTCGGTTTGA TCGGTACGATTCAATTAAAAACTGACCAATATGACCGGCAATTAGCATGACTTTAAGTGCTAGTTTGGTTTCAAATTAACCTTTTGTTTGGCTTTTGGTT TAGGTTAACAAAATTCTGTTTTCACCATTACATATAAAAACTCTTAAGTGCTAGTTTGGTTTGTAAATTTGTTTTGTTGCCATTTTTATTACTAGGCCAC AACAAGCCTTTGAATCCTAAACAATATTCTCTCATCGATAAAATATTAATTTTTAAGTTTTTGCTGATCATCTTACTTATGATTTTTCTTGGCATCTCTC TTCCTTTAGAAGTTAGACTTATCTCCATATGATTTACTAGGTTAATGAGACTTCTAATCGTTACCTCTATACATATCCAAACTATCAAAGACACAATTAT ACAATATTTTATATTATAGGAGCTCCTTAAACTTTATCCCTAATACATTTATTTCTAATCATATAGTTTTGTGTACGCTCTCATCGGACTCAACATTCAC ATGTCTGGTACATGAACTTTATTCTTTTATTGATATTTTTCCCGCTTAATATCCATCTCATTTTTTGTTTCTATTAATAATTTAAAAAACATTATCCTTA TTCTCATTTTATTTCCCGTTTTTAGTGATTAGTAAAATATGCTTTCAAAAGACTAACTTCTCAGATTGTGTCTACCAGGTACAAATGATACTTTCATCCT TAAACTCATCAACTTTATGTGGAATATATTTCTTACCGAGTTGGATGATTCAACATTAATGAATGCCATAAGACAACCTTCTCAAGTAACATTTATTGCT GCTGAAGTTGGAAATTTTGAGTTTTTATCTGTTGTTATTAGCACTTACCCAGATTTGATATGGGAACTAGACACAATGGGTCGAAGCATAATTCACACTG CTGTTTTGCATCGTCATGCTAGCATATTCAATTTAATACATGAAATAGGCCCAATGAAAGATTTGATTCTAACTTTCGTAGATGATGAAAGGAATAATTT ATTGCACTGTGCTGCAAGATTAGCTCCACCAAATCGACTTAATATTGTTTCTGGAGCAGCTCTTCAAATGATGCTCGAGTTATCATGGTTTGAGGAGGTG AAAAAAATAATGATACCATTATTCATAGAGATGAAAAATTCTGAAGACTTCACTCCTCGCCAAATATTCACCAAAGAGCATGAAGAGTTACTAAAAAATG GAGAGTCTTGGATGAAGACTACAGCAAATTCTTGCATGGTGGTTTCAACACTCATTGCTACTGGAGTGTTTTCTGCTGCATTTAGTGTTCCAGGTGGTAA CAATGACAACACAAGAAGTCCCAATTATATGGAGAAACCAGCATTCCTAGTATTTGTTTTGTCAGATGCTATAGCATTCATCTCATCTTCAACATCAATC ATAATTTTCTTGTCCATTCTTATGTCGCGATGCGCTGAGGAAGATTTTCTCAAGTCATTGCCATTGATGTTGATATCAGGACTAGTAGCATTGTTTATCT CAATCATAAGCATGATGGTAGCATTTAGTAGTGCCTTTTTCATAACATATTACCATGGACTGAAGTGGGTACCTAACTTCATTTCTGCACTTGCATTTGT ACCAATACCCTTATTTATATTCTTGCAGTTCCCTCTCTGGTCTGATATAGTTTATTCAACCTATATTTGTAGCTCTCTCTTCAGACCAAGTAAACGTATG ATTCACTAGAAAGATGGAGCTTTATTGAATAATTAATTTCAATTTCCTAAAGTGTGTGCCTTCTCCTTGAGTTATAATGGGTAAGTAGCAATTTAATGTT GACATATGTTCTATGTATAATAGAGCGGGTAGGTATCGGTGAATAGGTCTCTGGGCTGGATGAACGGC BLAST |
Tissue | pods |
Gene name | LI_gene_171034; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415219
Blastp | Ankyrin repeat-containing protein ITN1 from Arabidopsis with 21.77% of identity |
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Blastx | Alpha-latrotoxin-Lhe1a from Latrodectus with 24.44% of identity |
Eggnog | Ankyrin Repeat(COG0666) |
Kegg | Link to kegg annotations (AT3G12360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418119.1) |
Pfam | Domain of unknown function (PF13962.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |