| Id Trinity | TRINITY_DN49641_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_415222 |
| Sequence | ATTAGATTCTTTGTTTGCTTGGACTGTTCTTGACAAAGCATATATGAGTGAATGAGTCAATTATGATGTCTGTCAGTGTTCATATAAATTTACCAATTTG GAAGTAAAGCTAATTGAGCTGAGAAAAGATACATCAAAATCTTCTGAACATTACCTTTGAGAGAGAGATGGCTATACCAGACCCAACATCTTTTCCAAAT CTATTTCAGAGGGTTGCTTCAGCACAGTTTAGAAGGCCTCTCCTTCATTTAGTGTCCACTCGTAAGAAGAAAATAGACATAGATACCTAACTCAATGTGT TCCCCTTCACAAAGCAGCACTGAAAGGTGACTGGAAAGAAGCTAGTAAAATAATAGAACAAGATAATACATTGCTGAAAGCAGCCATAACAAAGGGTTGG GCCACAGTTCTTCACATAGCAGCAGGAACAAATCATGTTCACTTTGTGGAGGAACTAGTGCGAAAATTGAAACATGAAGATTTAGAGTTGGAAGATGAAA AATCAAACACTGCATTCTGTTTTGCTGCAGCAGTTGGGAATGTTGAAATTGCTAAGATAATGTTGAGAAGGAATGAATCATTGGCACAAATAAGGGGTGG AGAAGGATTAACTCCTCTTCACATGGCTCTTTTACAAGGAAGAAGGGAAATGGCATGGTACCTGTTACCTAAATCTAAAGAAATACTTCAAGAATTAGAC TGGAAGGTGTTGTTTCACATTTGTATAAATTCTGAACTCTATGGTAAGCACATTGCATAAAATTCCCTTGAATCATTTGAGTTTAAAAATCAAAGGGTAT ATACACATATATATCAGCAAGGGGAGGTAAGAAAATAAGAGTCTAATATCTATGCACCGAATAAGAGTGGGTGATGCACTGACAATGTTTTTCTAAAAAA ATCTTGTTCTAATGTAAATAAGTTGGGATGTTTTGCAGATTTAGCCTTGGAAATGCTAAAGGAAAAGAAAATGCTAGCTTTTGCTCCAATTGGAGATACT GGTGAGACAGGTTTGCATGTATTGGCCCGAAAGGCTTCAGTTTGTTGTTGCCAAAGTCTACAATATGGAAAACACCTCTTGCATTTCTGTACAAATGATA CTTTCATCCTTAAACTCATCAACTTTATGTGGAATATATTTCTTACCGAGTTGGATGATTCAACATTAATGAATGCCATAAGACAACCTTCTCAAGTAAC ATTTATTGCTGCTGAAGTTGGAAATTTTGAGTTTTTATCTGTTGTTATTAGCACTTACCCAGATTTGATATGGGAACTAGACACAATGGGTCGAAGCATA ATTCACACTGCTGTTTTGCATCGTCATGCTAGCATATTCAATTTAATACATGAAATAGGCCCAATGAAAGATTTGATTCTAACTTTCGTAGATGATGAAA GGAATAATTTATTGCACTGTGCTGCAAGATTAGCTCCACCAAATCGACTTAATATTGTTTCTGGAGCAGCTCTTCAAATGATGCTCGAGTTATCATGGTT TGAGGAGGTGAAAAAAATAATGATACCATTATTCATAGAGATGAAAAATTCTGAAGACTTCACTCCTCGCCAAATATTCACCAAAGAGCATGAAGAGTTA CTAAAAAATGGAGAGTCTTGGATGAAGACTACAGCAAATTCTTGCATGGTGGTTTCAACACTCATTGCTACTGGAGTGTTTTCTGCTGCATTTAGTGTTC CAGGTGGTAACAATGACAACACAAGAAGTCCCAATTATATGGAGAAACCAGCATTCCTAGTATTTGTTTTGTCAGATGCTATAGCATTCATCTCATCTTC AACATCAATCATAATTTTCTTGTCCATTCTTATGTCGCGATGCGCTGAGGAAGATTTTCTCAAGTCATTGCCATTGATGTTGATATCAGGACTAGTAGCA TTGTTTATCTCAATCATAAGCATGATGGTAGCATTTAGTAGTGCCTTTTTCATAACATATTACCATGGACTGAAGTGGGTACCTAACTTCATTTCTGCAC TTGCATTTGTACCAATACCCTTATTTATATTCTTGCAGTTCCCTCTCTGGTCTGATATAGTTTATTCAACCTATATTTGTAGCTCTCTCTTCAGACCAAG TAAACGTATGATTCACTAGAAAGATGGAGCTTTATTGAATAATTAATTTCAATTTCCTAAAGTGTGTGCCTTCTCCTTGAGTTATAATGGGTAAGTAGCA ATTTAATGTTGACATATGTTCTATGTATAATAGAGCGGGTAGGTATCGGTGAATAGGTCTCTGGGCTGGATGAACGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_171034; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415222
| Blastp | Ankyrin repeat-containing protein ITN1 from Arabidopsis with 21.84% of identity |
|---|---|
| Blastx | Alpha-latrotoxin-Lhe1a from Latrodectus with 24.44% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (AT3G12360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418119.1) |
| Pfam | Domain of unknown function (PF13962.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |