Ll_transcript_416406

• Id Trinity: TRINITY_DN49643_c0_g1_i2
• Name Transcript: Ll_transcript_416406
• Sequence: ATTATTACTTATAACACACAACAAGACCAACACATAGAGCACCAAACCCCACAACACCAACATCAACAACACCATTGTGCCCCATTCTTGAACCTTACAA AGTCTACTAATCCCAACCCATTTTCCATTCTTCTCTTATGGGTATCTAAATCTCTTACAACTTTGTGTTTTAGACTTCATTTCTCAAAAGGGTTTTGCTT AAGAAGTATTGAGTACAATCATGGCATGATGGTGATTGACAACACTGTTTTATATGCTTCTTCTGGTTTACTTCAACAAGAGAAAGTTGATTCAATGGAG GGTTTGATCTTGGTTGAAAACAATGAAGTTGTTGAAGAATGTAAAGGGAAGGGAAATGGAGTTAAAAATGAGATTTTTACTGATTTGAATGAAGAAAAGG GTTGTGAGAGTAGTTCCAGTTCTGAGTTATTGTCATTTGAGAACAATGGTAATGAAGAACACAGTCAGAGTAGCACTGAGGATTCATCTTCACCATCTTC AATAGGGTGGCCAGTTAAGAAAATTGCTGCATCAAATTGTAACAGTCCTTATGGAATTGAAGATAGTGAGAAAAAGCACTTTGGGAATAAGGATTTTGAG AAAAAAGTTTCAGTAGTATCAGAGGTTGAGATGATGAAGGAGAGGTTTGCAAAATTGTTACTTGGAGAAGATATGTCAGGTTGTGGAAATGGGGTTCCTA CAGCTTTGGCTATCTCAAATGCCATAACTAATTTATGTGCTACCCTCTTTGGGCAACTTTGGAGATTAGAACCTTTACGGGCCGAAAAGAAGACGATGTG GCGAAGAGAAATGGAATGGTTTCTTTCTGTCAGTGATCATATAGTTGAATTGATACCTACCTGGCAGACTTTTCCTGATGGGAGCAAGCTTGAGGTCATG ACTTGTCGACCACGGTCGGATCTTTATGTCAATCTTCCGGCTCTACGTAAATTAGATAACATGCTTCTTGAAATTCTAGATAGTTTTTTCGATACGGAAT TCTGGTATGTTGACCAAGGTGTTCTAGCCCAAGATGGTGATGGTCCATCTTCTTTTCGACAAGCGCTGCGCCAAGACGAGAAGTGGTGGCTTCCTGTACC CCGAGTCCCTCCTTGTGGCCTAAATGAGAATTCGAGAAAGCAATTGCAGCACAAGCGCGATTGCACAAACCAAATATTAAAAGCTGTAATGGCCATTAAC AGTATTACTTTAGCTGAAATGGACATTCCTGAGTCTTATTTGGAATCTCTGCCAAAGAATGCTAGAACCAGCTTAGGGGATGTTATTTATCGATATATCA CCTCGGATCATTTTTCTCCCGAGTGTTTGCTAGCTTGCCTTGATTTAACTTCTGAACATCAAGCCATAGAGATCGCGAACCGAGCTGAGGCTTCAATGTA TATTTGGCGTAAAAAGACCACCTCAAACTCAAAGCCTGCCAGTGTCACTGCGAAATCTAGTTCAAGATCATCATGGGAAATGGTTAAGGATCTGATGGTC GATGACAAAAGTGAATTGCTGTCGGAGCGCGCAGAAAGCCTTCTGATTTCCTTGAAGCAGCGTTTTCCTGGTCTCCCTCAAACTGCCTTAGATATGAGCA AAATCCAATACAACAAGGATGTTGGCCAAGCCATTCTGGAGAGCTACTCAAGAGTACTAGAGAGTTTAGCATTTAACATGGTCGCGCGCATCGATGACGT TCTCTACGTCGATGACTTAACAAAACACTCAGGTCAACCCTCATCTATCTCAAAAGTCGGTGTAATCACTCACAAGACTATATCAGTTCCATACTCAGCT CCAGCCCCGTGCACTCCGTATAAATCAGCTTTCGCAACGCCGAACCTTTCTCCTGCCCAAGTCATTAGCCCTTCAACAAAAGGATCAAAGTCACCACTCA TCAATAGCACTAATTTTCATCAGAGAGGGGTAGGAGTGAAGAAAGCCTTGACTGATTTTCTTAGCATAGATGCAAAAGGAAAAGCCTATGAAAGTTCAAA TGAGAAAGTTGTTTCGGAATCAGAAACACTTGATCAAGTGGCAGCATTTGAAAAAGACTGCAATGATATAACTGAAGAAGGTGGTAGCTCCATTATTATG GACCATGCATGGCAAGAATGAAAGGCTTAGTTATCTTTTATAGCTGAACCATTTATCAAAAGATATTTTATTTCATGGTATGTATATGAAATATGTAGAA GGATTAAGAATTTCACATATTTTAGAGTTTATACTCTAAAATAAATTACAAGTTGAATAATGTTTTCATGTTAGAAATTTTATGAGATAAAATATGAAAA ACTAGATAAGGGGCATTCCGAGAATTGAACTCGGGACCTCTCGCACCCTAAGCGAGAATCATACCAC
• Tissue: pods
• Gene name: LI_gene_171048;
• Additional information: details;

Expression of Ll_transcript_416406

FPKM

• PAB: 0.5
• PNAB: 14.6
• PS1: 12.8
• PS2: 4
• PS3: 6.4
• PW1: 10.4
• PW2: 7.9
• PW3: 4.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416406

• Blastp: Rop guanine nucleotide exchange factor 7 from Arabidopsis with 68.21% of identity
• Blastx: Rop guanine nucleotide exchange factor 7 from Arabidopsis with 73.54% of identity
• Eggnog: rop guanine nucleotide exchange factor(ENOG4110DIX)
• Kegg: Link to kegg annotations (AT5G02010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450277.1)
• Pfam: PRONE (Plant-specific Rop nucleotide exchanger) (PF03759.12)
• Rfam: tRNA (RF00005)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;