Ll_transcript_416408

• Id Trinity: TRINITY_DN49643_c0_g1_i4
• Name Transcript: Ll_transcript_416408
• Sequence: CTTTAAGCCACATGTTAAGTAATGATATATAGCTTCAACCTTGAGATATAAGTAATGTGAGTTAGCCAACTAAATTTTGTGCATCCTTCACTACCAAACA TGGTTTAACAACTTATGGATATCATTACCTATACCCAACAACAAGACCAAAGAGAACAACAAACCCCACAACACCAGCATCAACAGCATTGTGTCCCATT GGTGAAGCTAAGAAAGTCCAATAATCCCAACCCATTTTCCATTCTTGTATTATGGGTTTCTAAATCTCTTACAAGTTTGTGTTTTAGAGTTCAACTATCA CAAGGGTTTTGCTTCAAAAGGATTCAATACCATCATAGCATGGTGATTCATACCACTGCTCTATATGCTTCATCTGGTTTTCTAGAACAAGGGGAAGAAG CTGATTCAATGGAAAGTTTGGACTTGGCTGAAAACACTGAAGTTGTTGAAGAATGTAAAGGAAGAGAAAATGGTGCTAAAAATGAGTTTTTTGCTGATAT GATTGAAGAAAAGGGTTGTAACAGTAGTTCTGGCTCTGAGTTACTGTCATCTGAGAAAACTTGTAATGAAGAACACAGTCACAGTAGCACTGAGGAGTCA TCTTCACCAGATTCAGTAGGGTGGCCAGTTCAGAAAATTGTTGCATCAAATTGTACCAGTCCTCATGGAAGTGAAGAAAATGTGAATAAACACTTGGAGA ATAAGGAATTTGAGAAAAAAGTTTCAGTGTTATCAGAAGTTGAGATGATGAAGGAGAGGTTTGCAAAATTGTTACTTGGAGAAGATATGTCAGGTTGTGG AAATGGGGTTCCTACAGCTTTGGCTATCTCAAATGCCATAACTAATCTATGTGCCACACTTTTTGGGCAACTTTGGAGATTAGAACCTCTGCGTAAAGAG AAGAAGTCGATGTGGCGAAGGGAGATGGAGTGGTTTCTTTCTGTCAGTGATCATATAGTTGAATTCATACCTACTTGGCAGACCTATCCGGATGGGAGAA AGCTTGAGGTCATGACTTGTCGACCACGCTCCGATCTTTACGTCAATCTTCCAGCTCTGCGTAAATTAGATAACATGCTTCTTGAAATTCTAGATAGTTT TGTCAATACAGAATTCTGGTATGTAGACCAAGGTGTTCTAGCCCAGGATGGTGATTGTCCATCTTCTTTTCGACAAGCGCTTCGTCAAGACGAGAAATGG TGGCTCCCGGTCCCTCGGGTCCCTCCTTGTGGCCTCAATGAGAACTCAAGAAAGAAATTGCAGCACAAGCGCGATTGCACGAACCAAATATTAAAAGCTG TGATGGCCATTAACAGTATTACTTTAGCTGAAATGGACATTCCTGAGTCCTATTTGGAATCTTTGCCAAAGAATGCTAGAGCCAGCTTGGGGGATGTTAT TTATCGATATATCGTATCAGATCATTTTTCTACCGAGTGTTTGCTAGATTGCCTTGATTTAACTTCTGAACATCAAGCCATAGAGATTGCGAACAGAGCC GAGGCTTCTATGTACATTTGGCGCAAAAAGTCCACCTCGAATTCAAAGCCAGCCAGTGCCACTGCCAAATCTAGTTCAAGATCATCTTGGGAAATGGTTA AGGATCTTATGGTTGATGACAAAAGTGAATTGCTTTCGGAGCGCGCAGAAAGCATTTTGCTTTCCTTGAAGCAGTGTTTCCCTGGTCTCCCTCAAACAGC CTTAGATATGAGCAAAATCCAATATAACAAGGATGTTGGCAAAGCCATCTTGGAGAGCTACTCTAGAGTACTAGAGAGTTTGGCATTTAACATGGTTGCA CGCATTGATGATGTTCTCTATGTAGATAGCTTAACCAAACATTCATGTCAATTCTCATCTCTCTCAAAAGTTGGTGTAATTACTCACAAGACTATCTCAG TTCCATACACAGCTCCTGTACCAAACAACCCGAATAAATCGGCGTCCGCCTCGCCGAGCCTTTCTCCTACACAAGGTAGTAATAGCCCTTCAACAAAGGG TGCAAAATCACCACTCATCAATAGTACCAACCTTACTTATAGTGGGGTAGGTGTGAAGAAATCTTTGACTGATTTTCTTAGCAATGATGCAAAAGGAAAA AGCCTATGAGAGTTCAAATGAGAAACTTATTTGTGCCTCAGAAACACTTGATCAAGTGATAGCATTTGAAAGAGATTGTGGAGTCTAGTGATATTACTGA ACAAGGTGGTAGACCCAATAGGCCAATATAATGAACCATGCATGGAAAGAGTGAAATGGTAGTTATATTTTAGAGTGAGCATTTATCAAATGCCACAATT TTTTGTTACTTGTTCACATATTTATAGTGAATGGTATATGTTTATATTATTTACTTGTGGGAGTGGTGAAATGGTAGAAGTATTTTATGAGAATAAAAGA TATGACCCATATTATATGGGGAGTAAAGTATCTCTTTATACAAGAAGATAAATTATCTCTTTAAAA
• Tissue: pods
• Gene name: LI_gene_171048;
• Additional information: details;

Expression of Ll_transcript_416408

FPKM

• PAB: 0
• PNAB: 1.5
• PS1: 1.4
• PS2: 0.6
• PS3: 1.9
• PW1: 1.2
• PW2: 7.8
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416408

• Blastp: Rop guanine nucleotide exchange factor 7 from Arabidopsis with 67.43% of identity
• Blastx: Rop guanine nucleotide exchange factor 7 from Arabidopsis with 72.12% of identity
• Eggnog: rop guanine nucleotide exchange factor(ENOG4110DIX)
• Kegg: Link to kegg annotations (AT5G02010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450277.1)
• Pfam: PRONE (Plant-specific Rop nucleotide exchanger) (PF03759.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;