| Id Trinity | TRINITY_DN49652_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_413934 |
| Sequence | CGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGATTGCTCAAAAATATCAGTCTTTTAGTCAAAGTGCCA CACCAAATATATCTGTTCCAGAGTTACAAAATAATTGCAATATGTTTGCTTCATCAGCCCGTCAGTTGGCTAAAGCTTTAGAAGTTCCATTAGTTAATGA TTTAGGATATACGAAGAGATATGTGCGCTGCCTACAGATATCGGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACAGGGACTGGA CCTATGGAGAGCTTAACCAAATTCCCTCGGAGAAATAGTGGTTCTGCTGGACCTCGTGGTCAAGCACAACAGTACGAAGATCAATTACAGCAACAGCAGC AACAGCAGCAACAACAACAGCAGCAACAACAGCATCAACAAATGTTGGACCATAATTCAAATGGTGATCAAACTTCATCACAAGGCACTGCTATGCAATT TGCTTCCAACAATGGTATGGTTAATGTTAATAACTCCGTTAACGCAGCATCTGCATCAACCACCACAAGCACTATCGTCGCACTGCTCCACCAAAACTCC ATGAATTCTAGAAAAAGTTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGGTTCCATCCCCAGGTTCCTCCAATACTATGCCACAGG CCCTACCAAACTCATCTCCTTTTCAAGCACCAACACCATCTTCATCTAACAACCCCCAACAAACATCTCACCATCCCTTAACATCTGCCAATCACATGGG TACAACAAGCTCACCGGCTAATATTCCCATGCAACAACATCAGCCATCTCTTTCTGGTGAGGCCGACCCTACCGACTCCCAGAGCTCAGTCCAGAAAATC ATACACGAGATGATGTTGTCATCCCAGATGAACGGCACAGGTGAGATGGTTGGTGTTGGTTCTCTTGGAAATGGTATGAAGAATGTAAATGGTGTTCTGC CAACGGGCACTAATACAGGGCCGAACAGTGGCAATGGCCTGATGGGCAATGGTGCACTGAACAGTAATTCAGGTGCCGGAATTAATAGTTATGGGACAAC AAACCTTGGTCAAAGTGTTATGGCTAATGGAATGAGAGCTGCTATGAGAAATAACTTAGTCATGAATGGAAGGGGAGGAATGGCATTCATTGCTAGGGAT CAAGCTATGAATCATCAACAAGATTTGTCAAATCAACTACTTAGCGGGCTAGGAAACGGAAACGGTTTTAATAATCTGCAATTTGATTGGAAACCATCTC CATGAAAGCCTTTTTGTATGGTATGCATGTTGTGGTTCCTTATTGCTGCTTGTGCAGCATGAGCAAATGGTAGAATTGCCTTTAGCCCCTGATGATTGAA GAATGCAAATGGGTAGTGATAGGGCATAGGCCAGTATAATGATTTTATATATGAGTGGAAATTTGTTGGCTGGTTGTGTGGCTGATGGGTCTGATTTGTG AATTTCAAGTGTAACCTTTTAATTTTAATTTTTCTATCTTCATGGCTTTCACAAAATTATCCATGATACATGTGCAAACTTGAGGATGGATATCCTTTTT TGCTGCAAAAAGCAACTGGTATACTATCCATTGTGATGATTATTATGAAGTTCCTCCCTCCACATTATGAAGTAATCAACATTCAAAGTGGAATGAAGTA TGTTTATCCGATGTTACTTTACAAAATGTGGGAAAATGGGTACAAGGTATTATTTAAAGTATTTGAATCCAGACATATATGGAAAGATTATCCTCATTTG TAAGCAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_171130; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_413934
| Blastp | Transcriptional corepressor SEUSS from Arabidopsis with 54.42% of identity |
|---|---|
| Blastx | Transcriptional corepressor SEUSS from Arabidopsis with 85.59% of identity |
| Eggnog | NA(ENOG410XT7C) |
| Kegg | Link to kegg annotations (AT1G43850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415067.1) |
| Pfam | LIM-domain binding protein (PF01803.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |