| Id Trinity | TRINITY_DN49658_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_414241 |
| Sequence | AGGCTTATCTTTACTTAAAGTTGGTGGAAGAATGGTTTATTCAACATGCTCAATGAATCCTATTGAGAATGAAGCCGTTGTTGCAGAGGTTTTGCGTAGG TGTGGAGGGTCAGTTGAACTTGTTGATGTCTCAAGTGAGCTTCCCCAACTTATTCGCCGGCCAGGTCTCAAGAGCTGGAAGGTGCATGACAAGGGCACTT GGTTAGTCTCTTGCAAAGATGTGCCTAAGTACCGTAGAAGTGTAATTCTTCCTGGTATGTTTCCTGCTGGCGGAAGCTATCAGGAACTTGTTGACAACAG TAATTGTAATGCTGACATGGGAGATAATATTGGTGTTTGTACCAATGGAAATTCTGAAGATGGTGTTCAAACAGTTGAGGAACCTTTGACTCATCAGGCT GCTGAGGAAGTTTGTGATTTCCCTTTAGAGCATTGCATGAGGATAGTGCCTCATGATCAAAATACCGGAGCCTTCTTTATTGCAGTACTGCTAAAAGTTG CTCCTCTGCCAGCAACTCAAGAAAAATCTAAAACAGAAATTGTTGAGCAAAATGTAGAACCGTTAAATCTGAGTCTTGAAGATGCTCGAGCACTGCAGAT TAACTCATCAGAAGGTGTACTTGAAGAAGTCTCCAAAGCAGTTCCAGAGGAAATTTTAAATGACACTGAACAAAATACAGAAGATTTAGAAGTTAGTCCT GTTGAAGAACAGGATTCCAAGGAAACTGAAGAGCCTCCCATTGTAGAAAACATGGCAAAGAAGGTTCCATCCAAAAGAAAGCTACAAATTCAAGGCAGAT GGAGAGGCGTTGACCCTGTTGTCTTTTTCAAAGATGAAGCGATTATTAATAGTATAAGGGCATTTTATGGCATCGGTGAGCATTTTCCTTTGGATGGTCA CCTTGTTACAAGAAACAGTGATGCTAGTCATGTGAAAAGAATTTACTATGTCTCCAAGTCAGTCAAGGATGTTCTTAAGTTGAACTTCTCTGTTGGGCAA CAACTTAAAATAACTTCTGTTGGCCTGAAGATGTTTGTAAGTATATTTTATTCTCAATTAGGAGAAAATTTTATATTTATTGTTATTTACTTATTTATAT GTTTGATTTCTTTATCACCTGTGCTCCTTTTTTTAAATAAAAGTAACGAACATATATGTAATAGTGACTGTACCATTAGAAAAGGCCTAAGGGCAGTGGC AGGTAGGTGATGGTGAAGGTGCAGAAGATAGATCTAGGCATGAGAGACAGATTAACTCAGTTTGATTAGTATGATGGTACTTCACGAGTTGGTTCATAAA TTGTTCCGTGCTAAGTTGTTTTTATTTCTGGTTTCATCGATTCAAGTTTTTTTTTTGGTTTCATTGACTCAAATTTGATGAAATACGTGTTGAATGCTGT TGGATATGAACTATATAGTCAAGTACTCTGTTTTTATTGACATATGATAATGGTAAGGGTTATATAATTAATGTAACATGTAAATAATTCATTGACAACC TTTTTACAAACTTAATTTCTTTGCGGTTCATTATAAAACTTATCAAGGTGTATGCATGCCACAAGTTTTTATTAACTAGATGGTTAATATGTCAATGGTA TAGATTGTGGGAACTTGTAACATCCATGCAACGTGTAGCATTGTGCGACTTGTCCTTACTTTGTTTTGCATAGTAAGAAATGTGCTTTTTTATTTGTTGT TAGGACTTGTGAATAATTTGAGTGAAATGTACTTGACCTCATCATATAGGAAAGACAATCAGCACAAGAAGGTACCGATGCTCCATGTGCTTTCCGGATA TCATCTGAAGGATTGCCCCTTGTTCTCCCATACATAACCAAACAGATTTTACATGCATCTTCGGAAGACTTCAAGCGTCTTCTACAGGATAAAGATGTAA AGTTTGCAGATTTTGCTGATGCTAAGTTAGGTGAGAAGGCAGCAAACCTACTGCCAGGGTATTGTGTGGTAATTCTGGATAGAGGGAATAGATCTGCAAC AGAGTACCCCAAAGTAGATGAGTCAACGATAGCCATTGGATGCTGGAGGGGTAGGGTGAGATTGACAGTGATGGTCACTGCAATGGATTGTCAAGAATTG CTTGCAAGGCTTTTAATACGTCTAGACCCAGAAAAGGGTGCTTCAGTGAATGTTGACAAATCCTCTAATAATGTGGGAGATGAACCATAGCCTGTACCTG AGATCAATAGTATAACTGATGCTGATGTGAAAGCTGCAATTAGTTGAAAGTGACTGGTTAACAAATATTTATTGATACAGACATTTAAGTTATTGCATTT TATAGAAATGGTGATTTTTTTCCTTCACCCATAATACGTTGCTGATGGAATTACTTGATTTGGTTAACCTCGTTATCATGTTCCTAGAACAAAGTCAGAC TTCGGTTCATATTTGTATTGATATATTCTATAGCTTTGAAATGTTTACTCAATTTATTTCTGGGAAACTCTGTTGCTATGTGGATGCGGTTCAGAAATGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_171155; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_414241
| Blastp | tRNA (cytosine(34)-C(5))-methyltransferase from Gallus with 29.81% of identity |
|---|---|
| Blastx | tRNA (cytosine(34)-C(5))-methyltransferase from Gallus with 29.81% of identity |
| Eggnog | nOP2 Sun(COG0144) |
| Kegg | Link to kegg annotations (420938) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464114.1) |
| Pfam | 16S rRNA methyltransferase RsmB/F (PF01189.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |