| Id Trinity | TRINITY_DN49658_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_414252 |
| Sequence | GGAATGCCCATAATTTGTGGCATTGTTGGTTTTGTTTATTTAACATAGAAAAGAAAGAGCTCATTGTAAATTTTGAGTAGTGAACTCAGTCCAAACTCTT TTCACTGAAACATAGTGAGTACTCTCTCTCACAAGTCACAACCCAATCCTAAGCATCATCATGTTCAAGTTTGTTGTGAGAACTGCTTCAACTCCACGCA TCTACAACACTTTCGCTTCTTTCAACCTCCCTCGCTATGTATCATCCTTTGCCACAGTTGATGCTGAAGAGATATCAGGTTCTAGTCCTGCTGAAGTTTT GAATTTGGTGCAGGGTAAATGGATAGGATCTTCAAACTCAAATACAATTGTGGATCCTTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGAA ACAGGCATTCAGCCATTTGTTGAAAGCTTGTCCAGCTGTCCCAAACATGGTGTGCACAATCCTTTTAAGTCACCAGAAAGATATCTTATGTATGGAGATA TATCTGCTAAGGCAGCTCACATGCTTTCACTTCCTAAGGTTTCAGATTTCTTTACAAGGCTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTA TGGAGAAGTTTATGTAACTCAGAAATTTCTAGAGAATTTCTGCGGAGACCAGGTTCGTTTCCTGGCAAGGTCTTTTGCAGTACCTGGAAATCACCTTGGA CAGCAAAGTCACGGTTTTCGTTGGCCATATGGTCCGGTGGCGATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCAGTGCTTCAATTGATGGGTGCAC TTTATATGGGCAACAAGCCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAGCAAATGTTGCGTCTGCTTCACACCTGTGGCTTGCCTGTTGA GGATGTTGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTTTTGCAGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCA GAGAAGTTGGCTGGCGATTTGAAGGGAAAAGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCAACAGGAAGATTACATTG CATGGGTATGTGACCAGGATGCATATGCGTGTAGTGGTCAGAAATGCTCGGCACAATCATTGTTATTTATTCATGAGAACTGGTCTCAAACTAACTTGAT ATCTAAGTTGAAAGATCTTGCTGACAGAAGAAAGCTAGAGGATTTGACAGTTGGCCCAGTCCTTACCTTTACGACTGATTCAATGCTAGAACACGTGAAT AAATTACTTGAGATACCCGGATCAAAGCTGCTCTTTGGGGGTCAGCCTTTAAAGGACCATTCAATCCCGCCAATTTATGGTGCTATTAAACCGACAGCTA TTTATGTTCCTCTTGAGGAAATTGTGAAAGGCAAGAATTATGAGCTAGTGACAAAAGAAATATTTGGTCCTTTTCAGATTGTTACTGACTACAAGAGCAG TCAACTACCAATTGTGTTGGATGCTTTGGAAAGAATGCATGCTCATTTAACAGCTGCTGTAGTATCAAATGATCCTCTCTTTTTACAGGCAAGATTTTAT GGTTGCATGTGTATGGTTCAGTTTATCAATTCCTAACTAGATCTCAAATGTCTGTATGGCTCCATTCAGCCTCAGCTTGTTGCTTACATTGGTCTTTAAA TCATTGATTCGTTACTTTTTATTTTCATTCTTAGAATAAAAGCATAGCACTTTAGTGGATTGGACCATAGAATAATATTGCATATTTGCATATCAAAGTT TATTCTGCAGTTAAGGTGAATTACCTGCTAGATTTTTGTAGTAACTAAATCCTTCCAAAATTGAGATACCTGAGATTTCTCTAGTATCTAACATGTTACT TGTTTGTTAAACATGTAAAAGGGTGGGTTATCTTCAGAAATTTTTATCATAAATATGCTTTACTTTATCTGGTGGGTTCACAACATGATGTGATTATTTG TGGTGAAACATAAATATGCAGCAAGTCATTGGAAACACG BLAST |
| Tissue | pods |
| Gene name | LI_gene_171157; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_414252
| Blastp | Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial from Arabidopsis with 81.03% of identity |
|---|---|
| Blastx | Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial from Arabidopsis with 81.03% of identity |
| Eggnog | proline dehydrogenase, pyrroline-5-carboxylate dehydrogenase(COG4230) |
| Kegg | Link to kegg annotations (AT5G62530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464489.1) |
| Pfam | Aldehyde dehydrogenase family (PF00171.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |