Ll_transcript_414222

• Id Trinity: TRINITY_DN49664_c0_g1_i12
• Name Transcript: Ll_transcript_414222
• Sequence: ATTGAATGTAGTTGAGGAGTTGAACTACCCAACAGGACCATTTATCATTTTAATTCAATCTCAAATCAAATGGCTGCTTTCTCATCCCTTCTCAGGCGCC TCTACCTCACCGCTTACAATTGGATTGTTTTCGTTGGATGGGTTCAGGTTCTGTATCATGTTTTGAACACTTTGAAGGAATCGGGTCATGAAAATGTTTA CAATGCAGCCCAAAAGCCATTGCTTTTTGCTCAAACCGCTGCTGTGTTAGAGATTCTTCATGGTTTGGTGGGATTGGTGAGGTCTCCTGTATCAGCAACC TTGCCACAGATAGGTTCAAGGTTGTACCTGACTTGGGGCATTCTATGGAGTTTCCCTGAGACTCAGTCTCATGTGCTCGTTAGCTCCCTATTAATCAGTT GGTCTATCACTGAGATAATTCGCTATTCTTTCTTTGGATTTAAAGAGGCTTTTGGATTTGCCCCTTCGTGGCTCTTGTGGCTCAGATATAGCACTTTCTT ATTGCTTTATCCAACAGGCATTAGCAGTGAAGTTGGTCTAATATACATCGCCTTGCCATTCATCAAGGCGTCTGAGAATTATTGCGTGCGGATGCCCAAC ACATGGAACTTCTCATTCGATTACTTCTATGCCGCTATTGTTGTATTGGGAATCTACGTTCCAGGCATGAACTCATCATCTCTTGTTCTTACCACTGATG TCCTTTGGCTAATATTCCTTATGCTGACCTTGTAGCTGTTTGGATGTTATTATTTTATGCAGGTAGCCCTCACATGTATCGGTACATGCTTGCACAGAGA AAGAAAGCTCTCTCGAAATCAAAGAGAGAGTAGAGTAGTCTGTACTTTTTGCTTTCAGTTGTTCTTTTGGCCAAACATAGGATATATACGCATGTAATGG TTTGGATTCACTTATGTGTAGTAGAAATTCTTAATTGCTAATGTATCCTTAGAAGAAAAATGCTGGAGAAAGAAAAAAAGAAATTAACTCCCAGTTTTTG TTCTTTGGTGGTTTTGTGCCCATTCCTCTAACTGAGGCTGTTGTTTTTGGACCAGGATCACCTGTCCCAACACCCTGTCCCAAACCCTATCTCTGCCCAA TGAAATAATATAAAAATATTACTTTGTATTTTTATAATTATTTTGTTTA
• Tissue: pods
• Gene name: LI_gene_171195;
• Additional information: details;

Expression of Ll_transcript_414222

FPKM

• PAB: 0
• PNAB: 15.4
• PS1: 11.2
• PS2: 15.1
• PS3: 20.6
• PW1: 8
• PW2: 4
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_414222

• Blastp: Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A from Oryza sativa with 79.9% of identity
• Blastx: Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A from Oryza sativa with 79.9% of identity
• Eggnog: Protein tyrosine phosphatase-like(COG5198)
• Kegg: Link to kegg annotations (4335343)
• CantataDB: Link to cantataDB annotations (CNT0002686)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445392.1)
• Pfam: Protein tyrosine phosphatase-like protein, PTPLA (PF04387.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;