Ll_transcript_416388

• Id Trinity: TRINITY_DN49671_c0_g1_i4
• Name Transcript: Ll_transcript_416388
• Sequence: AGCACATTACTAAATTAAGATTTTAATATAACTCCTTTAAACAATCCCCTTCTTAAAAATGCCTCCGGGATCCGGCGCCTCCCACCCACACCCATAACCC CCTTTTTAACGGTGTTGCTCACGGCGGAGCATGCGACGGCTCCTCTATCTCCTAACTTTGTTAGAATCTCACAACATCATGCTCATCCCTTCTGGATCGA ACCTCTGTTTCTACGTTTTGCTACTTCCTGTTATTTATGGATCCTCATTCTAGATGCTTCCATTGTTATCCATTTTGTTCCCTTTTACATTTTGCTCTCT AGAGTGTCAATTTTTCAGCTGATTTTGTTCCTTCATCGCTTCAATTCTATAGTTTTTGTGGTGAAAGGAAGATTGATATGCTGTGCGAAAATGTCATTGA AAAGCATAGTACGAGAACTCAAGGAGATGAGGGATGGGATTGGTAGCATATCAAGGCGAGGTGTAGAAAGCAAGCATTGGCACAGTCGTATGAAGTCACA CATAGTTCCTGATGTCACAGTAACCCCACTCGAAAATATTCAACAGGGACCATGGGCAAATCTACCTCCTGAATTGCTTCTGGACATAATCCGGAGGATT GAAGAGAGTGAGACATCTTGGCCTGCACGCGCTGTCATTGTTTCTTGTGCTTCAGTGTGCAAATCATGGAGGGCTGTCACAAAAGAGATCGTTAAGACTC CTGAGCAATGTGGTAGGCTCACATTTCCTATTTCACTGAAGCAGCCGGGTTCTCGTGAATCTCCAATACAGTGCTTTATCAGGAGGAACAGAGAAACTTC TACATTTCTGTTGTACTATGGTCTGGTGCCATCGGAGAATGAGACTGATAAATTGTTATTAGCTGCCAAAAGGATAAGAAGGGCAACAGGCACAGACTTT GTCATATCTTTAGTTGCAGATGAGTTTTCTCGGTCCAGCAGCACATATCTTGGAAAACTGAGGTCTAATTTTTTGGGGACCAAGTTCACTATATATGACA GCCAGCCTCCATGTGAAGCTGGAATTCAACGAAATAGCCGTTCTTGTAGGAGATTTCAGTCTAAGCAGGTCTCACCAAGAGTTCCAGCATGTAACTATGT TGTTAGCACCATAGCTTATGAACTCAATGTTCTCCGTACAAGAGGGCCAAGAAGAATGCACTGCACCATGAACTCCATATCTATCTCAGCTATTCAGGAA GGGGGCAGTGCCCCAACTCCCACTTCTTTACCTCAAAGTATTGATAGACATTTTTCTCCCTCACCAGCATTGAAAGGAAAACGTCCGGTTACAGATTTAA ATTCTGAAAGCCTCTCAGAGCTACCGATGCAAAACCAAGGCTCGGTTGAGCCTCTTGTACTTAAAAACAAGGTTCCCAGATGGCATGAGCAGCTGCAATG CTGGTGCCTAAACTTCAAGGGTCGCGTTACAGTGGCTTCTGTTAAAAACTTTCAACTCGTGGCTGCTGTAGATCCATCGCACAACGTTTCTGCTTCAGAA CAAGAGAAGGTTATCTTGCAGTTTGGAAAGATCGGAAAAGACATATTTACCATGGATTACCTTTATCCACTCTCGGCCTTCCAAGCTTTTGCAATATGCT TAAGCAGCTTCGATACAAAACCCGCATGTGAATGAGACCGATGTATCTGGATCATCATCTTCTGCCGGTTTGTTTCATATATATAATGTGTAATATGCTA GGAACAGTTCATCAGGCATGGTTACATGCAAACGACAATCTTAGCTCTTCAGTCATTAGTATCATCTCCCTTATGTTAGTTGATATTGGTATTTAACATG TATGTTGTTTCATAACCCTGCAACTAAAATTAAATTAAAGTTAGCGAAATTTCAATTTCATATAATATATAGTTGCAGGGTATTCCTGATCTATGAATCT CTTGGTTATTTTCAAGTAGATATCATTTTCTGATGATTAAAA
• Tissue: pods
• Gene name: LI_gene_171234;
• Additional information: details;

Expression of Ll_transcript_416388

FPKM

• PAB: 3.9
• PNAB: 10.2
• PS1: 7.9
• PS2: 7.4
• PS3: 7.6
• PW1: 8
• PW2: 8.5
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416388

• Blastp: Tubby-like F-box protein 2 from Arabidopsis with 65.07% of identity
• Blastx: Tubby-like F-box protein 2 from Arabidopsis with 65.07% of identity
• Eggnog: tubby like protein(ENOG410XQFT)
• Kegg: Link to kegg annotations (AT2G18280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444767.1)
• Pfam: F-box domain (PF00646.32)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;