Ll_transcript_414589

• Id Trinity: TRINITY_DN49678_c2_g3_i3
• Name Transcript: Ll_transcript_414589
• Sequence: GGTGAATATCCACTGAGTATCATCCCTCATCGGAAAACACAGCAAGACTTGCTCTTACCAATTAGGGTTACCTCGTTCAGCTACTATTCACACATCATCG TTTTTTGTAAAAAATAATTCTAAAACTAAACAAATTAGAATATTTATTGTACTATTTTTTACGAGTTTCGGAGGAGATAAGTTATCTCTTGACATGACAT GAGGAGTAGATAGAGATTAATGTTTCATTGTGATAATTTCTCCTCATTTATCGAATTATTATGCCACACTCACAATGAAGATGCTGCTGAGTCCAACTAG GTATTCCTTCTTCAATCTTCCCAACTTTTACTTTCATTATCATCTCAAACAATACACTAATTCTACTCATGATGCTGTTTTATCATTTAACAATATCATA TATAAACCTCACTCTCCTTCCATTATTACTGAAATCAACAAAATTTTGGGTTCTATTGTGAAGTTGAAACACTATGAAACTGTTATTTCACTTTATAAAA AAATGGGTTTTTTGGGTATCTCACCATCAGTTATTACAATGAGTATCTTGATCAATTGTTACTGTCAATTGGGTCAAATGGGTTTTGCTTTTTCTTTGAT TGGGAACAACATCAAGAGAGGTTTTCAATTGGATGTGGTTACTTTCAATACTATATTGAATGGACTATGTAAAATTGGTAGTGTTAGGAAAGCTCTTGAA TTTCATGATCATGTAAGAGCACAAGGGTTTGTGTTTAATCAAGTTAGTTATATTACTTTAATCAATGGGCTATGTAAAGTAGGACAAACAAGTGCAGCCG GCGAATTGTTTCGGAAGGTCGAGAGACTAGCGGTTAGGCCTAACTTAAAGATGTATTCTGCTCTCATTGATGGACTCTGCAAAGATAGACTTGTAGTTGA GGCACTCGATTTGTTTTCTGAAATGATTGGCAGGGGGATTTCTCCGGACGTTGTCAGTTACAATTCTCTGATACATGGTTTGAGCGTTGAGGGCCAATTA AAAGAAGCAACTCGGTTTCTAAACGAAATGCGTCGAAAGAACATCAGTCCTACGTTGCGTACCTTCAACATAGTCATCGATGCACTGTGTAAAGAAGGGA GGGTCGGAGAAGCCCGAGATGTGTTTGATATGATGGCTAAAATGGGTTATAAGCCTAATGTTATTACTTATAGTGCCTTGATAGATGGATACTTTTTAAT GAAAGATGTGAAGAAGGCATCATGGTTATTTAATAATATGGACAAAAACGGCGTAGAACCCAGCGTTCATACGTATAACATTATGATTGATGGGTATTGC AAGGCTAAAAGGTTGGATGATGCAATGACGCTCTTTAAGGAAATGCGCAACCGAAATGTAGTTCCTGATACTGTAATTTACAGTTCTCTTATTGATGGCT TATGCAAATCAGGGAAATTCTCATCTGCACAAAATCTTGTTGATGAGATGCATAATAGTGGTCAACCTGTTGGTTTAATCACTTACACTATCTTGATAGA TGCTCTTTGCAAAAGCCAAGATCTTGACAAGGCGATTGAGTTATTTATGCGAATTGTTAACAAAGGAATCCGTCCCGATGTCTGCACATATACGGTTCTT ATCGATGGCTTGTGCAAAGGTGGAAGACTAAAGACCGCGAAAGAGTTTTTTCACCATATCGTCACTAAAGGCTGCCGATTAGATGTAAGAACATATTACG TTATGTTGAACGGACTTTTTAAAGAGGGCTTGTTTGATGAAGCGATGACCCTGCTTTCAAAAATGGATGACAGTGGTTGCCCCCCTGATTCCATTACTGT TGAAAAAGTTATTTCCACTCTTTTAGAAAAAAATGAGATTGAAAAGGTAGAGAAGTTTCTTCCCGAAATGAAAGTTAAAGACCCGCTGAATGAATAAACA ATATGTTGAATTTGCATTGGCCTCGCTCTCGCAATAAAAATGGATGGTGGTTCGTATTGCCTATCCGTTTTCCGAAAACGAGATCCTCTTCGTGTTTCGA TTCCAAGTCGTCCTTGCATGGAAGGTGGAACACAGTGGAATGTAAGTTCTGTTCATTTTGAAGATCATGGTGGGTCATCTTTAGTTATACTGGGATAGAA GAAGAAAAATTATTGAGGAAAAAGAGAAGAGTACAAATAGAGATGATACAATATCCTCATAGGAAATAGTAAAAAAAAAACTAGGTGGATCAAATTATGC TTAAATTCTATGTTTCTCCTCTGGTCTTAGGTTAGTTAAACAGCATTTGTGCATCCCATAGTTAAATGCTGAGTTGTTGGAGTATGCTATGAGCATGCAA TTTTTTATTGTGAAGCATTAGTTCATTATCTATAGGATGATGGGATACCCTCGGTTATACGAAAAAGACCGTCTTCGAATCCCCAACTTTGTGCACTGAG ATGGTATTTGCAATGTTTATATTGTAGCCATTGTTTAAAAACATGTTGGGAACTACATAAATTGTTAGTCTTTTATGTATGAACTTGGTATTTGTATGAA GAGCAGATTGCTTAAGTTCTTGACATGTATGTAGTTGAAGTTGAAAGTGTTGAACATGTTATAAAATTTCAC
• Tissue: pods
• Gene name: LI_gene_171298;
• Additional information: details;

Expression of Ll_transcript_414589

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.2
• PS2: 0.1
• PS3: 0.6
• PW1: 0.6
• PW2: 0.4
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_414589

• Blastp: Pentatricopeptide repeat-containing protein At3g22470, mitochondrial from Arabidopsis with 35.5% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g22470, mitochondrial from Arabidopsis with 35.5% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G22470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450233.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;